RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 I3L4J1 428 aa15.36■□□□□ 0.05
PRKCB-201ENST00000303531 PTGDRQ13258 359 aa15.36■□□□□ 0.05
PRKCB-201ENST00000303531 LGSNQ5TDP6 509 aa15.36■□□□□ 0.05
PRKCB-201ENST00000303531 LMNTD2Q8IXW0 634 aa15.36■□□□□ 0.05
PRKCB-201ENST00000303531 RGS16O15492 202 aaPredicted RBP15.36■□□□□ 0.05
PRKCB-201ENST00000303531 DDAH1O94760 285 aa15.36■□□□□ 0.05
PRKCB-201ENST00000303531 SLC39A2Q9NP94 309 aa15.36■□□□□ 0.05
PRKCB-201ENST00000303531 ARMCX3Q9UH62 379 aaPredicted RBP15.36■□□□□ 0.05
PRKCB-201ENST00000303531 SPATA31E1Q6ZUB1 1445 aa15.36■□□□□ 0.05
PRKCB-201ENST00000303531 TRMT2AQ8IZ69 625 aaKnown RBP15.36■□□□□ 0.05
PRKCB-201ENST00000303531 LRRC47Q8N1G4 583 aaKnown RBP15.36■□□□□ 0.05
PRKCB-201ENST00000303531 PPFIA4O75335 1185 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 ANKRD42Q8N9B4 389 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 TEKT1Q969V4 418 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 RTEL1Q9NZ71 1219 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 DBNLQ9UJU6 430 aaKnown RBP15.35■□□□□ 0.05
PRKCB-201ENST00000303531 STK32BQ9NY57 414 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 PYCARDQ9ULZ3 195 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 PRKG1Q13976 671 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 TBC1D31Q96DN5 1066 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 HAUS4Q9H6D7 363 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 COPRSQ9NQ92 184 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 NLRX1Q86UT6 975 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 FEZ2Q9UHY8 353 aaPredicted RBP15.35■□□□□ 0.05
PRKCB-201ENST00000303531 TMEM2Q9UHN6 1383 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 PRPF6O94906 941 aaKnown RBP15.35■□□□□ 0.05
PRKCB-201ENST00000303531 POLR2FP61218 127 aaKnown RBP15.35■□□□□ 0.05
PRKCB-201ENST00000303531 FAM102BQ5T8I3 360 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 PPP1R12CQ9BZL4 782 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 ADORA1P30542 326 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 ZSCAN26Q16670 478 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 DDX25Q9UHL0 483 aaKnown RBP15.35■□□□□ 0.05
PRKCB-201ENST00000303531 IVNS1ABPQ9Y6Y0 642 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 KDM5DQ9BY66 1539 aa15.35■□□□□ 0.05
PRKCB-201ENST00000303531 GNGT1P63211 74 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 DLGAP5Q15398 846 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 SUPT20HQ8NEM7 779 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 A0A1W2PQ27 194 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 A0A1W2PQ64 194 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 A0A1W2PQD8 194 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 CD2BP2O95400 341 aaKnown RBP15.34■□□□□ 0.05
PRKCB-201ENST00000303531 CHRNDQ07001 517 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 PROSER3Q2NL68 480 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 BRDTQ58F21 947 aaPredicted RBP15.34■□□□□ 0.05
PRKCB-201ENST00000303531 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRKCB-201ENST00000303531 NOD1Q9Y239 953 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 SH3BP5O60239 455 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 OTUD6AQ7L8S5 288 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 IWS1Q96ST2 819 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 GREM2Q9H772 168 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 GALNT17Q6IS24 598 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 CHURC1Q8WUH1 139 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 PFDN4Q9NQP4 134 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 PHKA1P46020 1223 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 UBE3CQ15386 1083 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 SLFN12Q8IYM2 578 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 PUS3Q9BZE2 481 aaKnown RBP15.34■□□□□ 0.05
PRKCB-201ENST00000303531 OSBPL3Q9H4L5 887 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 GPHNQ9NQX3 736 aaPredicted RBP15.34■□□□□ 0.05
PRKCB-201ENST00000303531 NRBP1Q9UHY1 535 aa15.34■□□□□ 0.05
PRKCB-201ENST00000303531 LONP1P36776 959 aaKnown RBP15.34■□□□□ 0.05
PRKCB-201ENST00000303531 STX2P32856 288 aa15.33■□□□□ 0.05
PRKCB-201ENST00000303531 GABPB2Q8TAK5 448 aaPredicted RBP15.33■□□□□ 0.05
PRKCB-201ENST00000303531 CARMIL3Q8ND23 1372 aa15.33■□□□□ 0.05
PRKCB-201ENST00000303531 ZMYM1Q5SVZ6 1142 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 ARHGAP24Q8N264 748 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 ALDH1B1P30837 517 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 CLNS1AP54105 237 aaKnown RBP15.33■□□□□ 0.04
PRKCB-201ENST00000303531 IRX3P78415 501 aaPredicted RBP15.33■□□□□ 0.04
PRKCB-201ENST00000303531 ZNF589Q86UQ0 364 aaPredicted RBP15.33■□□□□ 0.04
PRKCB-201ENST00000303531 DEPTORQ8TB45 409 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 HOOK2Q96ED9 719 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 VCX3BQ9H321 246 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 PCDHA5Q9Y5H7 936 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 TESPA1A2RU30 521 aaPredicted RBP15.33■□□□□ 0.04
PRKCB-201ENST00000303531 CYP21A2P08686 494 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 TCP1P17987 556 aaKnown RBP15.33■□□□□ 0.04
PRKCB-201ENST00000303531 TSNAXIP1Q2TAA8 658 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 TDRD7Q8NHU6 1098 aaKnown RBP15.33■□□□□ 0.04
PRKCB-201ENST00000303531 EPN1Q9Y6I3 576 aaPredicted RBP15.33■□□□□ 0.04
PRKCB-201ENST00000303531 K7ENM7 598 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 COBLO75128 1261 aa15.33■□□□□ 0.04
PRKCB-201ENST00000303531 COPB1P53618 953 aaKnown RBP15.33■□□□□ 0.04
PRKCB-201ENST00000303531 PSDA5PKW4 1024 aaPredicted RBP15.32■□□□□ 0.04
PRKCB-201ENST00000303531 GOLGA8KD6RF30 607 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 IFNB1P01574 187 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 SLC39A14Q15043 492 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 AFAP1L2Q8N4X5 818 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 PPP1R13BQ96KQ4 1090 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 ERBB4Q15303 1308 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 BTDP43251 543 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 ADAM9Q13443 819 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 DPH5Q9H2P9 285 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 RNF40O75150 1001 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 PDE8BO95263 885 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 CASP14P31944 242 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 ATP1A2P50993 1020 aa15.32■□□□□ 0.04
PRKCB-201ENST00000303531 ANKRD20A3Q5VUR7 823 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms