RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TSKSQ9UJT2 592 aa28.54■■■□□ 2.16
HOXC9-201ENST00000303450 ADGRA2Q96PE1 1338 aa28.54■■■□□ 2.16
HOXC9-201ENST00000303450 SLC16A2P36021 539 aa28.53■■■□□ 2.16
HOXC9-201ENST00000303450 ANKRD1Q15327 319 aa28.53■■■□□ 2.16
HOXC9-201ENST00000303450 BTNL9Q6UXG8 535 aa28.53■■■□□ 2.16
HOXC9-201ENST00000303450 CCDC144CPQ8IYA2 1237 aa28.53■■■□□ 2.16
HOXC9-201ENST00000303450 STAG2Q8N3U4 1231 aa28.53■■■□□ 2.16
HOXC9-201ENST00000303450 PALM3A6NDB9 673 aaPredicted RBP28.53■■■□□ 2.16
HOXC9-201ENST00000303450 HSPA1AP0DMV8 641 aaKnown RBP28.53■■■□□ 2.16
HOXC9-201ENST00000303450 HSPA1BP0DMV9 641 aaKnown RBP28.53■■■□□ 2.16
HOXC9-201ENST00000303450 ANKRD13CQ8N6S4 541 aa28.53■■■□□ 2.16
HOXC9-201ENST00000303450 PAGR1Q9BTK6 254 aa28.53■■■□□ 2.16
HOXC9-201ENST00000303450 GOLGA8BA8MQT2 603 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 KLRF2D3W0D1 207 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 VWA5AO00534 786 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 AK2P54819 239 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 SYDE2Q5VT97 1194 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 C17orf99Q6UX52 265 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 MB21D1Q8N884 522 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 FANCBQ8NB91 859 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 LARP6Q9BRS8 491 aaKnown RBP28.52■■■□□ 2.16
HOXC9-201ENST00000303450 UBA5Q9GZZ9 404 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 RBPJLQ9UBG7 517 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 PRR12Q9ULL5 1215 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 ADAMTS5Q9UNA0 930 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 RABGAP1Q9Y3P9 1069 aa28.52■■■□□ 2.16
HOXC9-201ENST00000303450 CTDP1Q9Y5B0 961 aaPredicted RBP28.52■■■□□ 2.16
HOXC9-201ENST00000303450 RCAN1P53805 252 aa28.51■■■□□ 2.15
HOXC9-201ENST00000303450 EVCP57679 992 aa28.51■■■□□ 2.15
HOXC9-201ENST00000303450 ZBED4O75132 1171 aa28.5■■■□□ 2.15
HOXC9-201ENST00000303450 BCRP11274 1271 aa28.5■■■□□ 2.15
HOXC9-201ENST00000303450 CPVLQ9H3G5 476 aa28.5■■■□□ 2.15
HOXC9-201ENST00000303450 TXNRD2Q9NNW7 524 aa28.5■■■□□ 2.15
HOXC9-201ENST00000303450 GOLGA8AA7E2F4 631 aa28.49■■■□□ 2.15
HOXC9-201ENST00000303450 DHX16O60231 1041 aaKnown RBP28.49■■■□□ 2.15
HOXC9-201ENST00000303450 FDX1P10109 184 aa28.49■■■□□ 2.15
HOXC9-201ENST00000303450 GNAQP50148 359 aa28.49■■■□□ 2.15
HOXC9-201ENST00000303450 METAP2P50579 478 aaKnown RBP eCLIP28.49■■■□□ 2.15
HOXC9-201ENST00000303450 FAM110CQ1W6H9 321 aa28.49■■■□□ 2.15
HOXC9-201ENST00000303450 POTEEQ6S8J3 1075 aa28.49■■■□□ 2.15
HOXC9-201ENST00000303450 GPRC5AQ8NFJ5 357 aa28.49■■■□□ 2.15
HOXC9-201ENST00000303450 GPR25O00155 361 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 FOXN1O15353 648 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 PEX10O60683 326 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 RTN1Q16799 776 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 ZNF274Q96GC6 653 aaPredicted RBP28.48■■■□□ 2.15
HOXC9-201ENST00000303450 SLC38A10Q9HBR0 1119 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 RBM28Q9NW13 759 aaKnown RBP28.48■■■□□ 2.15
HOXC9-201ENST00000303450 BTBD7Q9P203 1132 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 MORF4L1Q9UBU8 362 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 PDIA3P30101 505 aaKnown RBP28.48■■■□□ 2.15
HOXC9-201ENST00000303450 ERVK-9P63128 1117 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 ERVK-24P63145 666 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 PLS1Q14651 629 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 NOL8Q76FK4 1167 aaKnown RBP28.48■■■□□ 2.15
HOXC9-201ENST00000303450 IL27Q8NEV9 243 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 LZTS2Q9BRK4 669 aa28.48■■■□□ 2.15
HOXC9-201ENST00000303450 CNMDO75829 334 aa28.47■■■□□ 2.15
HOXC9-201ENST00000303450 PPP2R5BQ15173 497 aa28.47■■■□□ 2.15
HOXC9-201ENST00000303450 NOM1Q5C9Z4 860 aaKnown RBP28.47■■■□□ 2.15
HOXC9-201ENST00000303450 ADGRF4Q8IZF3 695 aa28.47■■■□□ 2.15
HOXC9-201ENST00000303450 VAT1LQ9HCJ6 419 aa28.47■■■□□ 2.15
HOXC9-201ENST00000303450 HPS5Q9UPZ3 1129 aa28.47■■■□□ 2.15
HOXC9-201ENST00000303450 A0A0G2JMZ2 1700 aa28.46■■■□□ 2.15
HOXC9-201ENST00000303450 COL11A1P12107 1806 aaPredicted RBP28.46■■■□□ 2.15
HOXC9-201ENST00000303450 ST18O60284 1047 aa28.46■■■□□ 2.15
HOXC9-201ENST00000303450 SP3Q02447 781 aa28.46■■■□□ 2.15
HOXC9-201ENST00000303450 TMEM132BQ14DG7 1078 aa28.46■■■□□ 2.15
HOXC9-201ENST00000303450 CCDC196A0A1B0GTZ2 297 aa28.45■■■□□ 2.15
HOXC9-201ENST00000303450 CTCFP49711 727 aaPredicted RBP28.45■■■□□ 2.15
HOXC9-201ENST00000303450 SNAP25P60880 206 aa28.45■■■□□ 2.15
HOXC9-201ENST00000303450 Q3C1V9 767 aa28.45■■■□□ 2.15
HOXC9-201ENST00000303450 CPXCR1Q8N123 301 aa28.45■■■□□ 2.15
HOXC9-201ENST00000303450 REPS2Q8NFH8 660 aa28.45■■■□□ 2.15
HOXC9-201ENST00000303450 RANBP17Q9H2T7 1088 aaKnown RBP28.45■■■□□ 2.15
HOXC9-201ENST00000303450 TPCN1Q9ULQ1 816 aa28.45■■■□□ 2.15
HOXC9-201ENST00000303450 FKTNO75072 461 aa28.44■■■□□ 2.14
HOXC9-201ENST00000303450 PLEKHA8P1O95397 391 aa28.44■■■□□ 2.14
HOXC9-201ENST00000303450 CCNA1P78396 465 aa28.44■■■□□ 2.14
HOXC9-201ENST00000303450 CCDC174Q6PII3 467 aa28.44■■■□□ 2.14
HOXC9-201ENST00000303450 TMTC3Q6ZXV5 915 aa28.44■■■□□ 2.14
HOXC9-201ENST00000303450 SPATC1LQ9H0A9 340 aa28.44■■■□□ 2.14
HOXC9-201ENST00000303450 BAZ2BQ9UIF8 2168 aaKnown RBP28.44■■■□□ 2.14
HOXC9-201ENST00000303450 CCT2P78371 535 aaKnown RBP28.43■■■□□ 2.14
HOXC9-201ENST00000303450 STK3Q13188 491 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 NBPF11Q86T75 865 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 ZNF296Q8WUU4 475 aaPredicted RBP28.43■■■□□ 2.14
HOXC9-201ENST00000303450 JMJD4Q9H9V9 463 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 RAVER2Q9HCJ3 691 aaKnown RBP28.43■■■□□ 2.14
HOXC9-201ENST00000303450 ZNF214Q9UL59 606 aaPredicted RBP28.43■■■□□ 2.14
HOXC9-201ENST00000303450 NID2Q14112 1375 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 HSPA8P11142 646 aaKnown RBP28.43■■■□□ 2.14
HOXC9-201ENST00000303450 SMARCA1P28370 1054 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 CDC27P30260 824 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 ADD1P35611 737 aaKnown RBP28.43■■■□□ 2.14
HOXC9-201ENST00000303450 STAT3P40763 770 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 OAZ1P54368 228 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 CCAR1Q8IX12 1150 aaKnown RBP28.43■■■□□ 2.14
HOXC9-201ENST00000303450 CMTR1Q8N1G2 835 aaKnown RBP28.43■■■□□ 2.14
HOXC9-201ENST00000303450 SRBD1Q8N5C6 995 aaKnown RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms