RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 IWS1Q96ST2 819 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 SLC13A4Q9UKG4 626 aa11.38□□□□□ -0.59
CLIP1-201ENST00000302528 ITSN2Q9NZM3 1697 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 WDR62O43379 1518 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 GNA14O95837 355 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 EEF1B2P24534 225 aaKnown RBP11.37□□□□□ -0.59
CLIP1-201ENST00000302528 ATP1A2P50993 1020 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 NLRP12P59046 1061 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 YWHAGP61981 247 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLIP1-201ENST00000302528 BFSP1Q12934 665 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 PPP2R5EQ16537 467 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 RINT1Q6NUQ1 792 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 BBS5Q8N3I7 341 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 DPH5Q9H2P9 285 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 MAST3O60307 1309 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 SCAF11Q99590 1463 aaKnown RBP11.37□□□□□ -0.59
CLIP1-201ENST00000302528 SYNJ2BP-COX16A0A087WUM0 186 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 EVI5O60447 810 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 ATF2P15336 505 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 EEF1DP29692 281 aaKnown RBP11.37□□□□□ -0.59
CLIP1-201ENST00000302528 SPATS2Q86XZ4 545 aaKnown RBP11.37□□□□□ -0.59
CLIP1-201ENST00000302528 TPH2Q8IWU9 490 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 IQCDQ96DY2 449 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 COX16Q9P0S2 106 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 EEF1GP26641 437 aaKnown RBP11.37□□□□□ -0.59
CLIP1-201ENST00000302528 CYP2J2P51589 502 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 ZBTB8OSQ8IWT0 167 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 RYBPQ8N488 228 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-201ENST00000302528 LINS1Q8NG48 757 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 UHMK1Q8TAS1 419 aaKnown RBP11.37□□□□□ -0.59
CLIP1-201ENST00000302528 SMCR8Q8TEV9 937 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-201ENST00000302528 SCINQ9Y6U3 715 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 TYW5A2RUC4 315 aaKnown RBP11.37□□□□□ -0.59
CLIP1-201ENST00000302528 ZNF75DP51815 510 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 ZSCAN26Q16670 478 aa11.37□□□□□ -0.59
CLIP1-201ENST00000302528 TRPA1O75762 1119 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 PYGLP06737 847 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 FAM102BQ5T8I3 360 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 POLR3CQ9BUI4 534 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-201ENST00000302528 ARMT1Q9H993 441 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 ARHGEF12Q9NZN5 1544 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 TCIRG1Q13488 830 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 ADPGKQ9BRR6 497 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 EFHD1Q9BUP0 239 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 C1orf112Q9NSG2 853 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 DNMT1P26358 1616 aaKnown RBP11.36□□□□□ -0.59
CLIP1-201ENST00000302528 FRMD3A2A2Y4 597 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 XRCC5P13010 732 aaKnown RBP11.36□□□□□ -0.59
CLIP1-201ENST00000302528 LIG4P49917 911 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 SNX1Q13596 522 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 POSTNQ15063 836 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 SNCBQ16143 134 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 ZBTB41Q5SVQ8 909 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 LRCH2Q5VUJ6 765 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 SESTD1Q86VW0 696 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 BBOF1Q8ND07 529 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 TRIM58Q8NG06 486 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 SLC5A4Q9NY91 659 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 A6NJR5 290 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 H7C0C1 242 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 HSPA8P11142 646 aaKnown RBP11.36□□□□□ -0.59
CLIP1-201ENST00000302528 HIBADHP31937 336 aaKnown RBP11.36□□□□□ -0.59
CLIP1-201ENST00000302528 ATP5OP48047 213 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 C8orf37Q96NL8 207 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 MLXIPQ9HAP2 919 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 KIF9Q9HAQ2 790 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-201ENST00000302528 INHBAP08476 426 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 PDE6CP51160 858 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 ATP6V0A1Q93050 837 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 UBN1Q9NPG3 1134 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 ZNF148Q9UQR1 794 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 SPATA31E1Q6ZUB1 1445 aa11.36□□□□□ -0.59
CLIP1-201ENST00000302528 PSDA5PKW4 1024 aaPredicted RBP11.35□□□□□ -0.59
CLIP1-201ENST00000302528 SRGAP2BP0DMP2 458 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 RPS6KB1P23443 525 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 ARHGDIAP52565 204 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 KAZNQ674X7 775 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 TMTC3Q6ZXV5 915 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 SMC5Q8IY18 1101 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 SCYL3Q8IZE3 742 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 KLHDC4Q8TBB5 520 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 CAPS2Q9BXY5 557 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 HYOU1Q9Y4L1 999 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 UHRF1BP1Q6BDS2 1440 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 HEXIM1O94992 359 aaKnown RBP11.35□□□□□ -0.59
CLIP1-201ENST00000302528 AKAP4Q5JQC9 854 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 CADPS2Q86UW7 1296 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 NR1H4Q96RI1 486 aaPredicted RBP11.35□□□□□ -0.59
CLIP1-201ENST00000302528 NT5C3AQ9H0P0 336 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 BLZF1Q9H2G9 400 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 PRDM1O75626 825 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 RPAINQ86UA6 219 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 FBXL13Q8NEE6 735 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 TSC1Q92574 1164 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 CCPG1Q9ULG6 757 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 GTPBP10A4D1E9 387 aaKnown RBP11.35□□□□□ -0.59
CLIP1-201ENST00000302528 VGLL3A8MV65 326 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 GAS7O60861 476 aa11.35□□□□□ -0.59
CLIP1-201ENST00000302528 ZNF202O95125 648 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms