RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 RBM43Q6ZSC3 357 aaKnown RBP13.51□□□□□ -0.25
PDGFD-201ENST00000302251 PAGE5Q96GU1 130 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 KAZALD1Q96I82 304 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 GSDMAQ96QA5 445 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 BPIFA3Q9BQP9 254 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 TUBGCP2Q9BSJ2 902 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 CRNKL1Q9BZJ0 848 aaKnown RBP13.51□□□□□ -0.25
PDGFD-201ENST00000302251 EPB41L5Q9HCM4 733 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 LRWD1Q9UFC0 647 aa13.51□□□□□ -0.25
PDGFD-201ENST00000302251 ARHGAP25P42331 645 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 EHHADHQ08426 723 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 SCARF1Q14162 830 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 DCAF17Q5H9S7 520 aaPredicted RBP13.5□□□□□ -0.25
PDGFD-201ENST00000302251 TBC1D10CQ8IV04 446 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 ZSCAN29Q8IWY8 852 aaPredicted RBP13.5□□□□□ -0.25
PDGFD-201ENST00000302251 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 BANK1Q8NDB2 785 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 TSGA10Q9BZW7 698 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 RTL9Q8NET4 1388 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 GCOM1H8Y6P7 765 aaPredicted RBP13.5□□□□□ -0.25
PDGFD-201ENST00000302251 SH2B2O14492 632 aaPredicted RBP13.5□□□□□ -0.25
PDGFD-201ENST00000302251 MYZAPP0CAP1 466 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 GNAT2P19087 354 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 GUCY1A2P33402 732 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 BCAMP50895 628 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 ANKS4BQ8N8V4 417 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 PNKPQ96T60 521 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 GREM2Q9H772 168 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 KCNK9Q9NPC2 374 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 FXR1P51114 621 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDGFD-201ENST00000302251 PAK2Q13177 524 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 MROH7-TTC4A0A0A0MT08 1334 aa13.5□□□□□ -0.25
PDGFD-201ENST00000302251 ESYT3A0FGR9 886 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 USP17L12C9JPN9 530 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 USP17L21D6R901 530 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 MOCS3O95396 460 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 INF2Q27J81 1249 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 FBXW10Q5XX13 1052 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 ARHGEF25Q86VW2 580 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 DZIP3Q86Y13 1208 aaKnown RBP13.49□□□□□ -0.25
PDGFD-201ENST00000302251 TRIM58Q8NG06 486 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 ZNF609O15014 1411 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 CYP2D7A0A087X1C5 515 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 H7C1D1 291 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 NEBLO76041 1014 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 DNM2P50570 870 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 NAA35Q5VZE5 725 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 KRT12Q99456 494 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 ZNF185O15231 689 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 PTPREP23469 700 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 PPARAQ07869 468 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 FOXR1Q6PIV2 292 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 RPGRIP1Q96KN7 1286 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 AATFQ9NY61 560 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDGFD-201ENST00000302251 CAMTA1Q9Y6Y1 1673 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 KCNK3O14649 394 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 CALM1P0DP23 149 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 CALM2P0DP24 149 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 CALM3P0DP25 149 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 CTNNA1P35221 906 aaKnown RBP13.49□□□□□ -0.25
PDGFD-201ENST00000302251 PUM3Q15397 648 aaKnown RBP13.49□□□□□ -0.25
PDGFD-201ENST00000302251 PPP1R7Q15435 360 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 KRT79Q5XKE5 535 aa13.49□□□□□ -0.25
PDGFD-201ENST00000302251 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDGFD-201ENST00000302251 PPP1R12BO60237 982 aaPredicted RBP13.48□□□□□ -0.25
PDGFD-201ENST00000302251 BUB1BO60566 1050 aaPredicted RBP13.48□□□□□ -0.25
PDGFD-201ENST00000302251 NNTQ13423 1086 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 USPL1Q5W0Q7 1092 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 SV2BQ7L1I2 683 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 CCDC155Q8N6L0 562 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 NUP58Q9BVL2 599 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 DPH5Q9H2P9 285 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 ABHD10Q9NUJ1 306 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 TCHHQ07283 1943 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 FAM205CA6NFA0 338 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 CLTAP09496 248 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 PEX19P40855 299 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 CUL4BQ13620 913 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 SLC9C1Q4G0N8 1177 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 SRPRBQ9Y5M8 271 aaKnown RBP13.48□□□□□ -0.25
PDGFD-201ENST00000302251 KIF4AO95239 1232 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 ATP1A1P05023 1023 aaKnown RBP13.48□□□□□ -0.25
PDGFD-201ENST00000302251 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 DAAM2Q86T65 1068 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 MGARPQ8TDB4 240 aa13.48□□□□□ -0.25
PDGFD-201ENST00000302251 SMCR8Q8TEV9 937 aaPredicted RBP13.48□□□□□ -0.25
PDGFD-201ENST00000302251 FMNL1O95466 1100 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 CCDC172P0C7W6 258 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 IFNAR1P17181 557 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 TECP42680 631 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 MMS22LQ6ZRQ5 1243 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 MMS19Q96T76 1030 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 ALDH8A1Q9H2A2 487 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 FOXP1Q9H334 677 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 SAMD15Q9P1V8 674 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 HYOU1Q9Y4L1 999 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 A0A1B0GUA9 196 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms