RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 RPS12P25398 132 aaKnown RBP13.75□□□□□ -0.21
TPM3-202ENST00000302206 LBX1P52954 281 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 CACNB3P54284 484 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 TYRO3Q06418 890 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 CXCL9Q07325 125 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 ZNF543Q08ER8 600 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 CERKLQ49MI3 558 aaPredicted RBP13.75□□□□□ -0.21
TPM3-202ENST00000302206 GPATCH4Q5T3I0 446 aaKnown RBP13.75□□□□□ -0.21
TPM3-202ENST00000302206 TMEM179Q6ZVK1 233 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 FAM83AQ86UY5 434 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 ZSCAN29Q8IWY8 852 aaPredicted RBP13.75□□□□□ -0.21
TPM3-202ENST00000302206 ELOA2Q8IYF1 753 aaPredicted RBP13.75□□□□□ -0.21
TPM3-202ENST00000302206 JDP2Q8WYK2 163 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 CLIP2Q9UDT6 1046 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 FBXO2Q9UK22 296 aaPredicted RBP13.75□□□□□ -0.21
TPM3-202ENST00000302206 SRPRBQ9Y5M8 271 aaKnown RBP13.75□□□□□ -0.21
TPM3-202ENST00000302206 M0R2N6 131 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 TBC1D12O60347 775 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 PFKFB1P16118 471 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 MARCKSP29966 332 aaPredicted RBP13.74□□□□□ -0.21
TPM3-202ENST00000302206 NDUFA8P51970 172 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 MLLT1Q03111 559 aaPredicted RBP13.74□□□□□ -0.21
TPM3-202ENST00000302206 CAMK4Q16566 473 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 USP17L2Q6R6M4 530 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 SHC4Q6S5L8 630 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 SASS6Q6UVJ0 657 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 DCAF4Q8WV16 495 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 ZMYND12Q9H0C1 365 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 SEC63Q9UGP8 760 aaKnown RBP13.74□□□□□ -0.21
TPM3-202ENST00000302206 PCDHB6Q9Y5E3 794 aa13.74□□□□□ -0.21
TPM3-202ENST00000302206 MYH4Q9Y623 1939 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 A0A1B0GVL5 298 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 MPHOSPH10O00566 681 aaKnown RBP13.73□□□□□ -0.21
TPM3-202ENST00000302206 ZNF202O95125 648 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 GOLGA8HP0CJ92 632 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 VEGFBP49765 207 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 ZNF280AP59817 542 aaPredicted RBP13.73□□□□□ -0.21
TPM3-202ENST00000302206 ABCB5Q2M3G0 1257 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 TTC38Q5R3I4 469 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 PPP1R18Q6NYC8 613 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 FAM200AQ8TCP9 573 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 FERMT2Q96AC1 680 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 WBP1LQ9NX94 342 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 MRVI1Q9Y6F6 885 aa13.73□□□□□ -0.21
TPM3-202ENST00000302206 SCN4AP35499 1836 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 IQCA1LA6NCM1 817 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 TMEM88BA6NKF7 163 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 MYO1BO43795 1136 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 DDNO94850 711 aaPredicted RBP13.72□□□□□ -0.21
TPM3-202ENST00000302206 GNA11P29992 359 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 SYKP43405 635 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 EARS2Q5JPH6 523 aaKnown RBP13.72□□□□□ -0.21
TPM3-202ENST00000302206 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
TPM3-202ENST00000302206 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 LDHDQ86WU2 507 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 CKAP2LQ8IYA6 745 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 LRRC47Q8N1G4 583 aaKnown RBP13.72□□□□□ -0.21
TPM3-202ENST00000302206 GMCL1P1Q8NEA9 526 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 GPKOWQ92917 476 aaPredicted RBP eCLIP13.72□□□□□ -0.211e-12■□□□□ 9.1
TPM3-202ENST00000302206 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 PDLIM2Q96JY6 352 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 FAM13BQ9NYF5 915 aa13.72□□□□□ -0.21
TPM3-202ENST00000302206 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
TPM3-202ENST00000302206 PASKQ96RG2 1323 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 EEF2P13639 858 aaKnown RBP13.71□□□□□ -0.21
TPM3-202ENST00000302206 NAPAP54920 295 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 ATP2C1P98194 919 aaPredicted RBP13.71□□□□□ -0.21
TPM3-202ENST00000302206 MAP3K10Q02779 954 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 ORC2Q13416 577 aaPredicted RBP13.71□□□□□ -0.21
TPM3-202ENST00000302206 STX1AQ16623 288 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 TYW1BQ6NUM6 668 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 KRT25Q7Z3Z0 450 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 RNF214Q8ND24 703 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 PIBF1Q8WXW3 757 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 DPF2Q92785 391 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 GMCL1Q96IK5 515 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 SDF4Q9BRK5 362 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 MTMR7Q9Y216 660 aa13.71□□□□□ -0.21
TPM3-202ENST00000302206 PNMA6FA0A0J9YX94 578 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 CCDC194A0A1B0GVG4 234 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 FAM205CA6NFA0 338 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 CCDC85CA6NKD9 419 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 TCP10L2B9ZVM9 353 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
TPM3-202ENST00000302206 EIF6P56537 245 aaKnown RBP13.7□□□□□ -0.22
TPM3-202ENST00000302206 ICA1Q05084 483 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 ARL6IP4Q66PJ3 421 aaKnown RBP13.7□□□□□ -0.22
TPM3-202ENST00000302206 PIK3AP1Q6ZUJ8 805 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 CLEC10AQ8IUN9 316 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 SIAH1Q8IUQ4 282 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 CLIC6Q96NY7 704 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 PIGSQ96S52 555 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
TPM3-202ENST00000302206 MYOZ2Q9NPC6 264 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 ANO10Q9NW15 660 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 KCNH3Q9ULD8 1083 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms