RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 FNBP4Q8N3X1 1017 aaPredicted RBP14.84□□□□□ -0.03
CASC4-201ENST00000299957 ENAHQ8N8S7 591 aaPredicted RBP14.84□□□□□ -0.03
CASC4-201ENST00000299957 UBLCP1Q8WVY7 318 aaPredicted RBP14.84□□□□□ -0.03
CASC4-201ENST00000299957 PYM1Q9BRP8 204 aaKnown RBP14.84□□□□□ -0.03
CASC4-201ENST00000299957 NAA15Q9BXJ9 866 aaKnown RBP14.84□□□□□ -0.03
CASC4-201ENST00000299957 GSTTP1A0A1W2PQM5 241 aa14.83□□□□□ -0.03
CASC4-201ENST00000299957 BICDL2A1A5D9 508 aa14.83□□□□□ -0.03
CASC4-201ENST00000299957 CEP104O60308 925 aa14.83□□□□□ -0.03
CASC4-201ENST00000299957 RASSF7Q02833 373 aa14.83□□□□□ -0.03
CASC4-201ENST00000299957 KRT26Q7Z3Y9 468 aa14.83□□□□□ -0.03
CASC4-201ENST00000299957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.83□□□□□ -0.036e-6■■□□□ 13.4
CASC4-201ENST00000299957 MORC2Q9Y6X9 1032 aaPredicted RBP14.83□□□□□ -0.03
CASC4-201ENST00000299957 PHLPP2Q6ZVD8 1323 aa14.83□□□□□ -0.03
CASC4-201ENST00000299957 GNA11P29992 359 aa14.83□□□□□ -0.04
CASC4-201ENST00000299957 CCT5P48643 541 aa14.83□□□□□ -0.04
CASC4-201ENST00000299957 NONOQ15233 471 aaKnown RBP eCLIP14.83□□□□□ -0.04
CASC4-201ENST00000299957 TTC31Q49AM3 519 aaPredicted RBP14.83□□□□□ -0.04
CASC4-201ENST00000299957 ERFEQ4G0M1 354 aa14.83□□□□□ -0.04
CASC4-201ENST00000299957 NYAP1Q6ZVC0 841 aa14.83□□□□□ -0.04
CASC4-201ENST00000299957 FOXP4Q8IVH2 680 aaPredicted RBP14.83□□□□□ -0.04
CASC4-201ENST00000299957 DIP2CQ9Y2E4 1556 aa14.83□□□□□ -0.04
CASC4-201ENST00000299957 OTUD6BQ8N6M0 293 aa14.83□□□□□ -0.04
CASC4-201ENST00000299957 SP4Q02446 784 aa14.83□□□□□ -0.04
CASC4-201ENST00000299957 RAD9BQ6WBX8 426 aa14.83□□□□□ -0.04
CASC4-201ENST00000299957 ATG3Q9NT62 314 aa14.83□□□□□ -0.04
CASC4-201ENST00000299957 WTIPA6NIX2 430 aaPredicted RBP14.82□□□□□ -0.04
CASC4-201ENST00000299957 TADA3O75528 432 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 LIFRP42702 1097 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 CASP8Q14790 479 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 MARCH10Q8NA82 808 aaPredicted RBP14.82□□□□□ -0.04
CASC4-201ENST00000299957 COA7Q96BR5 231 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 CNOT6LQ96LI5 555 aaKnown RBP14.82□□□□□ -0.04
CASC4-201ENST00000299957 GSDMAQ96QA5 445 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 ADGRG1Q9Y653 693 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 LOC102724428A0A0B4J2F2 783 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 TRIM66O15016 1216 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 TBCAO75347 108 aaKnown RBP14.82□□□□□ -0.04
CASC4-201ENST00000299957 SIK1P57059 783 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 BRD3Q15059 726 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 IGDCC4Q8TDY8 1250 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 EPB41L4AQ9HCS5 686 aaPredicted RBP14.82□□□□□ -0.04
CASC4-201ENST00000299957 A0A0U1RQJ8 604 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 GTPBP6O43824 516 aaPredicted RBP14.82□□□□□ -0.04
CASC4-201ENST00000299957 PPP1R12BO60237 982 aaPredicted RBP14.82□□□□□ -0.04
CASC4-201ENST00000299957 N4BP1O75113 896 aaKnown RBP14.82□□□□□ -0.04
CASC4-201ENST00000299957 MFAP3LO75121 409 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 SLC16A2P36021 539 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 CYP4A11Q02928 519 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 KCTD19Q17RG1 926 aaPredicted RBP14.82□□□□□ -0.04
CASC4-201ENST00000299957 TICAM2Q86XR7 235 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 BCAS4Q8TDM0 211 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 SELENOSQ9BQE4 189 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 PPANQ9NQ55 473 aaKnown RBP14.82□□□□□ -0.04
CASC4-201ENST00000299957 RIPOR2Q9Y4F9 1068 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 KIAA1210Q9ULL0 1709 aa14.82□□□□□ -0.04
CASC4-201ENST00000299957 COL15A1P39059 1388 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 ABCB4P21439 1286 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 ERCC5P28715 1186 aaPredicted RBP14.81□□□□□ -0.04
CASC4-201ENST00000299957 PRCPP42785 496 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 EHHADHQ08426 723 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 TMEM132AQ24JP5 1023 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 RNF26Q9BY78 433 aaPredicted RBP14.81□□□□□ -0.04
CASC4-201ENST00000299957 SMARCAL1Q9NZC9 954 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 SRP68Q9UHB9 627 aaKnown RBP14.81□□□□□ -0.04
CASC4-201ENST00000299957 PRDM4Q9UKN5 801 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 PCDHB13Q9Y5F0 798 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 RNF40O75150 1001 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 NDUFA10O95299 355 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 MOCS3O95396 460 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 SCNN1DP51172 638 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 CALCRLQ16602 461 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 REXO1Q8N1G1 1221 aaKnown RBP14.81□□□□□ -0.04
CASC4-201ENST00000299957 WDR17Q8IZU2 1322 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 ESYT3A0FGR9 886 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 FTCDO95954 541 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 VSNL1P62760 191 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 TC2NQ8N9U0 490 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 EYA3Q99504 573 aa14.81□□□□□ -0.04
CASC4-201ENST00000299957 PAIP2Q9BPZ3 127 aaKnown RBP14.81□□□□□ -0.04
CASC4-201ENST00000299957 TTC26A0AVF1 554 aa14.8□□□□□ -0.04
CASC4-201ENST00000299957 ANKRD62A6NC57 917 aa14.8□□□□□ -0.04
CASC4-201ENST00000299957 POLR2FP61218 127 aaKnown RBP14.8□□□□□ -0.04
CASC4-201ENST00000299957 GNGT1P63211 74 aa14.8□□□□□ -0.04
CASC4-201ENST00000299957 KCNB2Q92953 911 aa14.8□□□□□ -0.04
CASC4-201ENST00000299957 ZNF185O15231 689 aa14.8□□□□□ -0.04
CASC4-201ENST00000299957 E2F4Q16254 413 aa14.8□□□□□ -0.04
CASC4-201ENST00000299957 TRIML1Q8N9V2 468 aa14.8□□□□□ -0.04
CASC4-201ENST00000299957 PROCA1Q8NCQ7 364 aaPredicted RBP14.8□□□□□ -0.04
CASC4-201ENST00000299957 MRRFQ96E11 262 aaKnown RBP14.8□□□□□ -0.04
CASC4-201ENST00000299957 RTCBQ9Y3I0 505 aaKnown RBP14.8□□□□□ -0.04
CASC4-201ENST00000299957 MROH1Q8NDA8 1641 aa14.8□□□□□ -0.04
CASC4-201ENST00000299957 FRMPD1Q5SYB0 1578 aa14.8□□□□□ -0.04
CASC4-201ENST00000299957 ARHGEF28Q8N1W1 1705 aaKnown RBP14.79□□□□□ -0.04
CASC4-201ENST00000299957 CCDC151A5D8V7 595 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 DDX39AO00148 427 aaKnown RBP14.79□□□□□ -0.04
CASC4-201ENST00000299957 KLHL30Q0D2K2 578 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 PARP10Q53GL7 1025 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 CELF1Q92879 486 aaKnown RBP14.79□□□□□ -0.04
CASC4-201ENST00000299957 FBXO2Q9UK22 296 aaPredicted RBP14.79□□□□□ -0.04
CASC4-201ENST00000299957 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms