RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 CYLC1P35663 651 aaPredicted RBP15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 ZNF658Q5TYW1 1059 aaPredicted RBP15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 FAM43BQ6ZT52 329 aaPredicted RBP15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 STAMQ92783 540 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 BLZF1Q9H2G9 400 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 TACC3Q9Y6A5 838 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 PDS5AQ29RF7 1337 aaKnown RBP15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 RIC1Q4ADV7 1423 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 H0YHG0 523 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 PARP1P09874 1014 aaKnown RBP15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 CCDC57Q2TAC2 916 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 EARS2Q5JPH6 523 aaKnown RBP15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 PDXDC2PQ6P474 469 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 TTLL7Q6ZT98 887 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 MTRQ99707 1265 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 H7C1D1 291 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 GTPBP6O43824 516 aaPredicted RBP15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 RCAN1P53805 252 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 TSR1Q2NL82 804 aaKnown RBP15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 CCDC170Q8IYT3 715 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 RAPGEF4Q8WZA2 1011 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 ZKSCAN4Q969J2 545 aaPredicted RBP15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 TTYH3Q9C0H2 523 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 ZNF532Q9HCE3 1301 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 CHUKO15111 745 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 HSF2BPO75031 334 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 NAP1L1P55209 391 aaKnown RBP15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 EMC10Q5UCC4 262 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 KDM7AQ6ZMT4 941 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 MICALCLQ6ZW33 695 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 CMTR1Q8N1G2 835 aaKnown RBP15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 ZNF512BQ96KM6 892 aaPredicted RBP15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 STRBPQ96SI9 672 aaKnown RBP15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 RUFY1Q96T51 708 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 CNNM2Q9H8M5 875 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 EPB41L4AQ9HCS5 686 aaPredicted RBP15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 PIH1D3Q9NQM4 214 aaKnown RBP15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 RGPD5Q99666 1765 aa15.09■□□□□ 0.01
RPUSD4-201ENST00000298317 TCRBV5S4A2TA0A5A2 114 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 WNT7AO00755 349 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 A1BGP04217 495 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 PRLRP16471 622 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 NNTQ13423 1086 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 NAA35Q5VZE5 725 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 CCDC82Q8N4S0 544 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 SPATA4Q8NEY3 305 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 HINFPQ9BQA5 517 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 EPN3Q9H201 632 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 VCPKMTQ9H867 229 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 MCM8Q9UJA3 840 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 DUSP10Q9Y6W6 482 aa15.08■□□□□ 0.01
RPUSD4-201ENST00000298317 EEF1GP26641 437 aaKnown RBP15.08■□□□□ 0
RPUSD4-201ENST00000298317 LSP1P33241 339 aa15.08■□□□□ 0
RPUSD4-201ENST00000298317 CTDSPL2Q05D32 466 aa15.08■□□□□ 0
RPUSD4-201ENST00000298317 PLCB4Q15147 1175 aa15.08■□□□□ 0
RPUSD4-201ENST00000298317 PREPLQ4J6C6 727 aaPredicted RBP15.08■□□□□ 0
RPUSD4-201ENST00000298317 IFNL2Q8IZJ0 200 aa15.08■□□□□ 0
RPUSD4-201ENST00000298317 ZIM3Q96PE6 472 aa15.08■□□□□ 0
RPUSD4-201ENST00000298317 TSGA10Q9BZW7 698 aa15.08■□□□□ 0
RPUSD4-201ENST00000298317 KRT23Q9C075 422 aa15.08■□□□□ 0
RPUSD4-201ENST00000298317 NHEJ1Q9H9Q4 299 aaPredicted RBP15.08■□□□□ 0
RPUSD4-201ENST00000298317 RBM28Q9NW13 759 aaKnown RBP15.08■□□□□ 0
RPUSD4-201ENST00000298317 RMND1Q9NWS8 449 aa15.08■□□□□ 0
RPUSD4-201ENST00000298317 STIM2Q9P246 746 aa15.08■□□□□ 0
RPUSD4-201ENST00000298317 MEGF6O75095 1541 aa15.08■□□□□ 0
RPUSD4-201ENST00000298317 IPO7O95373 1038 aaKnown RBP15.07■□□□□ 0
RPUSD4-201ENST00000298317 PDE6AP16499 860 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 VAV2P52735 878 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 PPARAQ07869 468 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 NEDD9Q14511 834 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 WTAPQ15007 396 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 AKNAD1Q5T1N1 836 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 HAUS3Q68CZ6 603 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 RNF26Q9BY78 433 aaPredicted RBP15.07■□□□□ 0
RPUSD4-201ENST00000298317 CD248Q9HCU0 757 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.07■□□□□ 0
RPUSD4-201ENST00000298317 MACROD2A1Z1Q3 448 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 KRT2P35908 639 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 PRCPP42785 496 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 SMTNP53814 917 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 SH2D3CQ8N5H7 860 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 TRIM58Q8NG06 486 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 DCAF5Q96JK2 942 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 RNPC3Q96LT9 517 aaKnown RBP15.07■□□□□ 0
RPUSD4-201ENST00000298317 PYM1Q9BRP8 204 aaKnown RBP15.07■□□□□ 0
RPUSD4-201ENST00000298317 PHF20Q9BVI0 1012 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 GGA2Q9UJY4 613 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 GDAQ9Y2T3 454 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 FER1L4A9Z1Z3 1794 aa15.07■□□□□ 0
RPUSD4-201ENST00000298317 SOS2Q07890 1332 aaPredicted RBP15.06■□□□□ 0
RPUSD4-201ENST00000298317 IDH1O75874 414 aaKnown RBP15.06■□□□□ 0
RPUSD4-201ENST00000298317 RASSF9O75901 435 aa15.06■□□□□ 0
RPUSD4-201ENST00000298317 CLSTN1O94985 981 aa15.06■□□□□ 0
RPUSD4-201ENST00000298317 ATP2C1P98194 919 aaPredicted RBP15.06■□□□□ 0
RPUSD4-201ENST00000298317 ACTN3Q08043 901 aaPredicted RBP15.06■□□□□ 0
RPUSD4-201ENST00000298317 KIF5AQ12840 1032 aa15.06■□□□□ 0
RPUSD4-201ENST00000298317 PPP2R5AQ15172 486 aa15.06■□□□□ 0
RPUSD4-201ENST00000298317 ANKLE2Q86XL3 938 aa15.06■□□□□ 0
RPUSD4-201ENST00000298317 IFNL3Q8IZI9 196 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms