RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 GUCY1A2P33402 732 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 USP14P54578 494 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 NR1I3Q14994 352 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 MICALCLQ6ZW33 695 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 EHD2Q9NZN4 543 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 TRIM75PA6NK02 468 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 GNPATO15228 680 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 SEC24CP53992 1094 aa16.62■□□□□ 0.25
SPIDR-201ENST00000297423 TDRD12Q587J7 1177 aaKnown RBP16.62■□□□□ 0.25
SPIDR-201ENST00000297423 NAA15Q9BXJ9 866 aaKnown RBP16.62■□□□□ 0.25
SPIDR-201ENST00000297423 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.62■□□□□ 0.251e-6■■■■□ 22.4
SPIDR-201ENST00000297423 SYF2O95926 243 aaKnown RBP16.61■□□□□ 0.25
SPIDR-201ENST00000297423 MYBL2P10244 700 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 RTN1Q16799 776 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 KANK3Q6NY19 840 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 MSANTD4Q8NCY6 345 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 HELBQ8NG08 1087 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-201ENST00000297423 CEP131Q9UPN4 1083 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 PPP6R2O75170 966 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 NDUFA10O95299 355 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 GYPCP04921 128 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 TUBBP07437 444 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 ERVK-24P63145 666 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 ARID5AQ03989 594 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 KRT31Q15323 416 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 IQUBQ8NA54 791 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 CCDC42Q96M95 316 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 LAMB4A4D0S4 1761 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 KRT14P02533 472 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 APOA5Q6Q788 366 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 B4GALNT4Q76KP1 1039 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 GREM2Q9H772 168 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 RTCBQ9Y3I0 505 aaKnown RBP16.61■□□□□ 0.25
SPIDR-201ENST00000297423 DUSP10Q9Y6W6 482 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 BCL9LQ86UU0 1499 aa16.61■□□□□ 0.25
SPIDR-201ENST00000297423 FAM205CA6NFA0 338 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 XBP1P17861 261 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 NELFBQ8WX92 580 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 BAIAP2L1Q9UHR4 511 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 HPS5Q9UPZ3 1129 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 CIAO1O76071 339 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 MCM7P33993 719 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 IGHMBP2P38935 993 aaKnown RBP16.6■□□□□ 0.25
SPIDR-201ENST00000297423 APBA1Q02410 837 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
SPIDR-201ENST00000297423 OXER1Q8TDS5 423 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 ABHD10Q9NUJ1 306 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 CDHR2Q9BYE9 1310 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 KCNJ18B7U540 433 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 CYLC1P35663 651 aaPredicted RBP16.6■□□□□ 0.25
SPIDR-201ENST00000297423 KCNJ12Q14500 433 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 ARL8AQ96BM9 186 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 CCDC43Q96MW1 224 aaKnown RBP16.6■□□□□ 0.25
SPIDR-201ENST00000297423 RAB21Q9UL25 225 aa16.6■□□□□ 0.25
SPIDR-201ENST00000297423 IQSEC3Q9UPP2 1182 aaPredicted RBP16.6■□□□□ 0.25
SPIDR-201ENST00000297423 SMIM23A6NLE4 172 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 COPB1P53618 953 aaKnown RBP16.59■□□□□ 0.25
SPIDR-201ENST00000297423 SF3B2Q13435 895 aaKnown RBP16.59■□□□□ 0.25
SPIDR-201ENST00000297423 CYB5R4Q7L1T6 521 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 TAX1BP1Q86VP1 789 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 TTLL11Q8NHH1 800 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 BUB1O43683 1085 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 PPP1R12BO60237 982 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-201ENST00000297423 SUSD4Q5VX71 490 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 C8orf74Q6P047 294 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 OR8K1Q8NGG5 319 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 SYMPKQ92797 1274 aaKnown RBP16.59■□□□□ 0.25
SPIDR-201ENST00000297423 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 TRIM49BA6NDI0 452 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 SKAP2O75563 359 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-201ENST00000297423 CD44P16070 742 aaKnown RBP16.59■□□□□ 0.25
SPIDR-201ENST00000297423 NNTQ13423 1086 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 MORC3Q14149 939 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 WASF1Q92558 559 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 XAGE2Q96GT9 111 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 PLA2G12BQ9BX93 195 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 CCDC113Q9H0I3 377 aa16.59■□□□□ 0.25
SPIDR-201ENST00000297423 N4BP2Q86UW6 1770 aaPredicted RBP16.58■□□□□ 0.25
SPIDR-201ENST00000297423 TBX2Q13207 712 aaPredicted RBP16.58■□□□□ 0.25
SPIDR-201ENST00000297423 TUBB2AQ13885 445 aa16.58■□□□□ 0.25
SPIDR-201ENST00000297423 TYW1BQ6NUM6 668 aa16.58■□□□□ 0.25
SPIDR-201ENST00000297423 HDAC7Q8WUI4 952 aa16.58■□□□□ 0.25
SPIDR-201ENST00000297423 LRRC1Q9BTT6 524 aa16.58■□□□□ 0.25
SPIDR-201ENST00000297423 TUBB2BQ9BVA1 445 aa16.58■□□□□ 0.25
SPIDR-201ENST00000297423 MMRN2Q9H8L6 949 aa16.58■□□□□ 0.25
SPIDR-201ENST00000297423 VEZTQ9HBM0 779 aa16.58■□□□□ 0.25
SPIDR-201ENST00000297423 GPR108Q9NPR9 543 aa16.58■□□□□ 0.25
SPIDR-201ENST00000297423 TOGARAM1Q9Y4F4 1720 aa16.58■□□□□ 0.24
SPIDR-201ENST00000297423 USO1O60763 962 aaKnown RBP16.58■□□□□ 0.24
SPIDR-201ENST00000297423 EZRP15311 586 aaKnown RBP16.58■□□□□ 0.24
SPIDR-201ENST00000297423 VAV2P52735 878 aa16.58■□□□□ 0.24
SPIDR-201ENST00000297423 ANTXR2P58335 489 aa16.58■□□□□ 0.24
SPIDR-201ENST00000297423 TUBB4BP68371 445 aa16.58■□□□□ 0.24
SPIDR-201ENST00000297423 RASGRP2Q7LDG7 609 aa16.58■□□□□ 0.24
SPIDR-201ENST00000297423 ATG9AQ7Z3C6 839 aa16.58■□□□□ 0.24
SPIDR-201ENST00000297423 KRT26Q7Z3Y9 468 aa16.58■□□□□ 0.24
SPIDR-201ENST00000297423 PNMA8AQ86V59 439 aaPredicted RBP16.58■□□□□ 0.24
SPIDR-201ENST00000297423 ZNF34Q8IZ26 560 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms