RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 BMP15O95972 392 aa15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 EEF2P13639 858 aaKnown RBP15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 ZSCAN30Q86W11 494 aa15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 ZSCAN29Q8IWY8 852 aaPredicted RBP15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 CNNM3Q8NE01 707 aa15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 FERMT2Q96AC1 680 aa15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 JMJD4Q9H9V9 463 aa15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 NYAP2Q9P242 653 aa15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 SERTAD1Q9UHV2 236 aa15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 ZNRF3Q9ULT6 936 aa15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 SMCO2A6NFE2 343 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 PPP1R11O60927 126 aaPredicted RBP15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 BMP6P22004 513 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 MCM7P33993 719 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 NLRP12P59046 1061 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 PLCB2Q00722 1185 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 CXCL9Q07325 125 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 PLA2G4DQ86XP0 818 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 MTMR8Q96EF0 704 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 SGIP1Q9BQI5 828 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 MTFR1LQ9H019 292 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 GPCPD1Q9NPB8 672 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 FAM13BQ9NYF5 915 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 PCDHA5Q9Y5H7 936 aa15.52■□□□□ 0.07
CHMP4C-201ENST00000297265 CNTNAP1P78357 1384 aa15.51■□□□□ 0.07
CHMP4C-201ENST00000297265 SARSP49591 514 aaKnown RBP15.51■□□□□ 0.07
CHMP4C-201ENST00000297265 NAPAP54920 295 aa15.51■□□□□ 0.07
CHMP4C-201ENST00000297265 SEPT2Q15019 361 aa15.51■□□□□ 0.07
CHMP4C-201ENST00000297265 NT5DC1Q5TFE4 455 aa15.51■□□□□ 0.07
CHMP4C-201ENST00000297265 ADGRF4Q8IZF3 695 aa15.51■□□□□ 0.07
CHMP4C-201ENST00000297265 SYMPKQ92797 1274 aaKnown RBP15.51■□□□□ 0.07
CHMP4C-201ENST00000297265 BPIFA3Q9BQP9 254 aa15.51■□□□□ 0.07
CHMP4C-201ENST00000297265 KANSL2Q9H9L4 492 aa15.51■□□□□ 0.07
CHMP4C-201ENST00000297265 ESYT2A0FGR8 921 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 EDIL3O43854 480 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 PRR29P0C7W0 189 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 INF2Q27J81 1249 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 ISM2Q6H9L7 571 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 PDILTQ8N807 584 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 SPATA20Q8TB22 786 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 COA7Q96BR5 231 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 ZBED3Q96IU2 234 aaPredicted RBP15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 ZNF70Q9UC06 446 aaPredicted RBP15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 CCDC39Q9UFE4 941 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 CLRN2A0PK11 232 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 VWA3AA6NCI4 1184 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 GDF11O95390 407 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 CLCN1P35523 988 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 SLC16A2P36021 539 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 NCAPHQ15003 741 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 SOGA3Q5TF21 947 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 ARL6IP4Q66PJ3 421 aaKnown RBP15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 KCTD1Q719H9 257 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 SH3RF1Q7Z6J0 888 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 CEP57L1Q8IYX8 460 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 MTMR14Q8NCE2 650 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 TMEM60Q9H2L4 133 aa15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 SEC63Q9UGP8 760 aaKnown RBP15.5■□□□□ 0.07
CHMP4C-201ENST00000297265 CCDC194A0A1B0GVG4 234 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 TCP10L2B9ZVM9 353 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 NFKBIEO00221 500 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 ATP2B2Q01814 1243 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 SPDYE2Q495Y8 402 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 DALRD3Q5D0E6 543 aaKnown RBP15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 GPATCH4Q5T3I0 446 aaKnown RBP15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 SARM1Q6SZW1 724 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 TMEM179Q6ZVK1 233 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 GRAMD1CQ8IYS0 662 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 AGBL3Q8NEM8 1001 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 CSRNP1Q96S65 589 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 PGAP2Q9UHJ9 254 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 ZKSCAN5Q9Y2L8 839 aa15.49■□□□□ 0.07
CHMP4C-201ENST00000297265 PNMA6FA0A0J9YX94 578 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 hCG_1984214I3L0E3 225 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 GNA11P29992 359 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 ZNF75DP51815 510 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 POSTNQ15063 836 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 DLGAP5Q15398 846 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 E2F4Q16254 413 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 CDAN1Q8IWY9 1227 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 NIM1KQ8IY84 436 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 AOPEPQ8N6M6 819 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 ZNF713Q8N859 430 aaPredicted RBP15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 CCDC12Q8WUD4 166 aaPredicted RBP15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 FAM151AQ8WW52 585 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 HSD3B7Q9H2F3 369 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 C6orf50Q9HD87 102 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 SHTN1A0MZ66 631 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 USP17L10C9JJH3 530 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 ABCB5Q2M3G0 1257 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 OGFOD1Q8N543 542 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 HDAC9Q9UKV0 1011 aa15.48■□□□□ 0.07
CHMP4C-201ENST00000297265 A0A1W2PRG0 241 aa15.47■□□□□ 0.07
CHMP4C-201ENST00000297265 GH2P01242 217 aa15.47■□□□□ 0.07
CHMP4C-201ENST00000297265 SLFN14P0C7P3 912 aa15.47■□□□□ 0.07
CHMP4C-201ENST00000297265 PPP4R3BQ5MIZ7 849 aa15.47■□□□□ 0.07
CHMP4C-201ENST00000297265 ZNF830Q96NB3 372 aaPredicted RBP15.47■□□□□ 0.07
CHMP4C-201ENST00000297265 NAT10Q9H0A0 1025 aaKnown RBP15.47■□□□□ 0.07
CHMP4C-201ENST00000297265 TMEM260Q9NX78 707 aa15.47■□□□□ 0.07
CHMP4C-201ENST00000297265 BIN2Q9UBW5 565 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms