RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 TCP10Q12799 353 aa18.22■□□□□ 0.51
DCLK2-201ENST00000296550 USP17L1Q7RTZ2 530 aa18.22■□□□□ 0.51
DCLK2-201ENST00000296550 LEMD3Q9Y2U8 911 aa18.22■□□□□ 0.51
DCLK2-201ENST00000296550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
DCLK2-201ENST00000296550 SYCP3Q8IZU3 236 aa18.21■□□□□ 0.51
DCLK2-201ENST00000296550 LRRC47Q8N1G4 583 aaKnown RBP18.21■□□□□ 0.51
DCLK2-201ENST00000296550 DCP1AQ9NPI6 582 aaPredicted RBP18.21■□□□□ 0.51
DCLK2-201ENST00000296550 SOWAHDA6NJG2 315 aa18.21■□□□□ 0.51
DCLK2-201ENST00000296550 DNM2P50570 870 aa18.21■□□□□ 0.51
DCLK2-201ENST00000296550 FAM84BQ96KN1 310 aaPredicted RBP18.21■□□□□ 0.51
DCLK2-201ENST00000296550 TMEM51Q9NW97 253 aa18.21■□□□□ 0.51
DCLK2-201ENST00000296550 FER1L4A9Z1Z3 1794 aa18.21■□□□□ 0.51
DCLK2-201ENST00000296550 COL15A1P39059 1388 aa18.21■□□□□ 0.51
DCLK2-201ENST00000296550 KNDC1Q76NI1 1749 aa18.21■□□□□ 0.51
DCLK2-201ENST00000296550 AKAP12Q02952 1782 aa18.21■□□□□ 0.5
DCLK2-201ENST00000296550 APBA3O96018 575 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 CAPN2P17655 700 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 RAD51AP2Q09MP3 1159 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 FBXO38Q6PIJ6 1188 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 EPN1Q9Y6I3 576 aaPredicted RBP18.2■□□□□ 0.5
DCLK2-201ENST00000296550 MROH7-TTC4A0A0A0MT08 1334 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 XDHP47989 1333 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 UBE2Q2LH0YL09 131 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 HERC4Q5GLZ8 1057 aaPredicted RBP18.2■□□□□ 0.5
DCLK2-201ENST00000296550 TBC1D7Q9P0N9 293 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 FBXO2Q9UK22 296 aaPredicted RBP18.2■□□□□ 0.5
DCLK2-201ENST00000296550 SAMM50Q9Y512 469 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 ATP2B4P23634 1241 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 PAXIP1Q6ZW49 1069 aaPredicted RBP18.2■□□□□ 0.5
DCLK2-201ENST00000296550 EHMT1Q9H9B1 1298 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 PIK3C2AO00443 1686 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 FAM205CA6NFA0 338 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 KIAA0754O94854 1291 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 USP8P40818 1118 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 SLC1A4P43007 532 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 PRPF4BQ13523 1007 aaKnown RBP18.2■□□□□ 0.5
DCLK2-201ENST00000296550 MSL1Q68DK7 614 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 STXBP4Q6ZWJ1 553 aa18.2■□□□□ 0.5
DCLK2-201ENST00000296550 RBM26Q5T8P6 1007 aaKnown RBP18.19■□□□□ 0.5
DCLK2-201ENST00000296550 TUBE1Q9UJT0 475 aa18.19■□□□□ 0.5
DCLK2-201ENST00000296550 RAPGEF1Q13905 1077 aa18.19■□□□□ 0.5
DCLK2-201ENST00000296550 ZNF658Q5TYW1 1059 aaPredicted RBP18.19■□□□□ 0.5
DCLK2-201ENST00000296550 SMIM5Q71RC9 77 aa18.19■□□□□ 0.5
DCLK2-201ENST00000296550 ZFP91Q96JP5 570 aaPredicted RBP18.19■□□□□ 0.5
DCLK2-201ENST00000296550 SLC39A2Q9NP94 309 aa18.19■□□□□ 0.5
DCLK2-201ENST00000296550 MAGEA1P43355 309 aa18.19■□□□□ 0.5
DCLK2-201ENST00000296550 USP49Q70CQ1 688 aa18.19■□□□□ 0.5
DCLK2-201ENST00000296550 CCDC84Q86UT8 332 aaPredicted RBP18.19■□□□□ 0.5
DCLK2-201ENST00000296550 DGKHQ86XP1 1220 aa18.19■□□□□ 0.5
DCLK2-201ENST00000296550 TSGA10Q9BZW7 698 aa18.19■□□□□ 0.5
DCLK2-201ENST00000296550 E4F1Q66K89 784 aaPredicted RBP18.18■□□□□ 0.5
DCLK2-201ENST00000296550 NELFCDQ8IXH7 590 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 SECISBP2LQ93073 1101 aaKnown RBP18.18■□□□□ 0.5
DCLK2-201ENST00000296550 USP40Q9NVE5 1235 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 CAMTA2O94983 1202 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 TBC1D9BQ66K14 1250 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 USP17L2Q6R6M4 530 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 SLC35F6Q8N357 371 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 GPR101Q96P66 508 aaPredicted RBP18.18■□□□□ 0.5
DCLK2-201ENST00000296550 TRIM37O94972 964 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 CETN1Q12798 172 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 DOK7Q18PE1 504 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 C2CD5Q86YS7 1000 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 PSMB7Q99436 277 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 QTRT2Q9H974 415 aaKnown RBP18.18■□□□□ 0.5
DCLK2-201ENST00000296550 SHTN1A0MZ66 631 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 OAS2P29728 719 aaKnown RBP18.18■□□□□ 0.5
DCLK2-201ENST00000296550 TYW1BQ6NUM6 668 aa18.18■□□□□ 0.5
DCLK2-201ENST00000296550 SERPINB2P05120 415 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 SMC1AQ14683 1233 aaKnown RBP18.17■□□□□ 0.5
DCLK2-201ENST00000296550 IFI16Q16666 785 aaKnown RBP18.17■□□□□ 0.5
DCLK2-201ENST00000296550 NAP1L4Q99733 375 aaKnown RBP18.17■□□□□ 0.5
DCLK2-201ENST00000296550 TUBGCP2Q9BSJ2 902 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 CDC23Q9UJX2 597 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 TRPC5Q9UL62 973 aaPredicted RBP18.17■□□□□ 0.5
DCLK2-201ENST00000296550 GDAQ9Y2T3 454 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 NWD1Q149M9 1564 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 SCNN1DP51172 638 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 CUL4BQ13620 913 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 RRAGAQ7L523 313 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 ACRBPQ8NEB7 543 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 H0YIN7 160 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 RPS6KA4O75676 772 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 TRAF1Q13077 416 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 KRT31Q15323 416 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 PFKFB3Q16875 520 aaPredicted RBP18.17■□□□□ 0.5
DCLK2-201ENST00000296550 DCAF17Q5H9S7 520 aaPredicted RBP18.17■□□□□ 0.5
DCLK2-201ENST00000296550 HAUS4Q9H6D7 363 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 NLRC4Q9NPP4 1024 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 RWDD2AQ9UIY3 292 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 SAR1BQ9Y6B6 198 aa18.17■□□□□ 0.5
DCLK2-201ENST00000296550 ARL6IP4Q66PJ3 421 aaKnown RBP18.16■□□□□ 0.5
DCLK2-201ENST00000296550 RABGGTAQ92696 567 aa18.16■□□□□ 0.5
DCLK2-201ENST00000296550 B4DLN1 442 aa18.16■□□□□ 0.5
DCLK2-201ENST00000296550 CETN3O15182 167 aa18.16■□□□□ 0.5
DCLK2-201ENST00000296550 SLC44A5Q8NCS7 719 aa18.16■□□□□ 0.5
DCLK2-201ENST00000296550 PANX2Q96RD6 677 aa18.16■□□□□ 0.5
DCLK2-201ENST00000296550 TEX33O43247 280 aa18.16■□□□□ 0.5
DCLK2-201ENST00000296550 SEC31AO94979 1220 aaKnown RBP18.16■□□□□ 0.5
DCLK2-201ENST00000296550 GRIN1Q05586 938 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms