RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 DCAF4Q8WV16 495 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 SOCS4Q8WXH5 440 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 RLFQ13129 1914 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 LAMA4Q16363 1823 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 SLC25A27O95847 323 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 PTPREP23469 700 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 CYB5R4Q7L1T6 521 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 SHCBP1Q8NEM2 672 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 ZNF333Q96JL9 665 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 MROH8Q9H579 483 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 TAF6LQ9Y6J9 622 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 TNKSO95271 1327 aa14.17□□□□□ -0.14
HMGB2-201ENST00000296503 ERICH2A1L162 156 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 SLC15A5A6NIM6 579 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 SLC27A2O14975 620 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 STRNO43815 780 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 FDX1P10109 184 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 RGS2P41220 211 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 MORN1Q5T089 497 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
HMGB2-201ENST00000296503 CREB3L3Q68CJ9 461 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 RASGRP2Q7LDG7 609 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 RIOX2Q8IUF8 465 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 ENAHQ8N8S7 591 aaPredicted RBP14.16□□□□□ -0.14
HMGB2-201ENST00000296503 RAVER2Q9HCJ3 691 aaKnown RBP14.16□□□□□ -0.14
HMGB2-201ENST00000296503 FRMPD2Q68DX3 1309 aaPredicted RBP14.16□□□□□ -0.14
HMGB2-201ENST00000296503 IFIT3O14879 490 aaKnown RBP14.16□□□□□ -0.14
HMGB2-201ENST00000296503 PLA2G6O60733 806 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 MAP2K5Q13163 448 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 NECTIN1Q15223 517 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 RNF20Q5VTR2 975 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 SNRNP48Q6IEG0 339 aaKnown RBP14.16□□□□□ -0.14
HMGB2-201ENST00000296503 TTBK2Q6IQ55 1244 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 STOX1Q6ZVD7 989 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 CHST3Q7LGC8 479 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 DPP9Q86TI2 863 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 PNMA1Q8ND90 353 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 REPS2Q8NFH8 660 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 ANKS1AQ92625 1134 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 SLC38A10Q9HBR0 1119 aa14.16□□□□□ -0.14
HMGB2-201ENST00000296503 ZNF214Q9UL59 606 aaPredicted RBP14.16□□□□□ -0.14
HMGB2-201ENST00000296503 PDHBP11177 359 aa14.15□□□□□ -0.14
HMGB2-201ENST00000296503 FCER1AP12319 257 aa14.15□□□□□ -0.14
HMGB2-201ENST00000296503 SLC16A2P36021 539 aa14.15□□□□□ -0.14
HMGB2-201ENST00000296503 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.14
HMGB2-201ENST00000296503 MTFR1Q15390 333 aa14.15□□□□□ -0.14
HMGB2-201ENST00000296503 USP6NLQ92738 828 aa14.15□□□□□ -0.14
HMGB2-201ENST00000296503 TEX13BQ9BXU2 312 aa14.15□□□□□ -0.14
HMGB2-201ENST00000296503 INHAP05111 366 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 XRCC5P13010 732 aaKnown RBP14.14□□□□□ -0.15
HMGB2-201ENST00000296503 COPB2P35606 906 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 SNAP25P60880 206 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 PRR12Q9ULL5 1215 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 PARP14Q460N5 1801 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 ADORA2AP29274 412 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 ZNF543Q08ER8 600 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 GRB14Q14449 540 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 KCTD2Q14681 263 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 CCDC174Q6PII3 467 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 TRMT44Q8IYL2 757 aaKnown RBP14.14□□□□□ -0.15
HMGB2-201ENST00000296503 MMP19Q99542 508 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 RNF208Q9H0X6 261 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 SLC5A4Q9NY91 659 aa14.14□□□□□ -0.15
HMGB2-201ENST00000296503 COL11A1P12107 1806 aaPredicted RBP14.13□□□□□ -0.15
HMGB2-201ENST00000296503 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
HMGB2-201ENST00000296503 HMGCRP04035 888 aa14.13□□□□□ -0.15
HMGB2-201ENST00000296503 GOLGA8HP0CJ92 632 aa14.13□□□□□ -0.15
HMGB2-201ENST00000296503 CCL5P13501 91 aa14.13□□□□□ -0.15
HMGB2-201ENST00000296503 ZKSCAN1P17029 563 aaPredicted RBP14.13□□□□□ -0.15
HMGB2-201ENST00000296503 WTAPQ15007 396 aa14.13□□□□□ -0.15
HMGB2-201ENST00000296503 SEC23AQ15436 765 aa14.13□□□□□ -0.15
HMGB2-201ENST00000296503 CCL14Q16627 93 aa14.13□□□□□ -0.15
HMGB2-201ENST00000296503 SYDE2Q5VT97 1194 aa14.13□□□□□ -0.15
HMGB2-201ENST00000296503 APBA2Q99767 749 aa14.13□□□□□ -0.15
HMGB2-201ENST00000296503 RIPK3Q9Y572 518 aa14.13□□□□□ -0.15
HMGB2-201ENST00000296503 POTEFA5A3E0 1075 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 SNHG28P0DPA3 235 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 MCM5P33992 734 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 OAZ1P54368 228 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 TMEM67Q5HYA8 995 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 GPATCH4Q5T3I0 446 aaKnown RBP14.12□□□□□ -0.15
HMGB2-201ENST00000296503 BTNL9Q6UXG8 535 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 MB21D2Q8IYB1 491 aaPredicted RBP14.12□□□□□ -0.15
HMGB2-201ENST00000296503 ABRAQ8N0Z2 381 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 TRIB2Q92519 343 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 AGBL1Q96MI9 1066 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 A0A0G2JMZ2 1700 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 REC8O95072 547 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 PARP1P09874 1014 aaKnown RBP14.12□□□□□ -0.15
HMGB2-201ENST00000296503 TRIM32Q13049 653 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 NPLOC4Q8TAT6 608 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 DDX11Q96FC9 970 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 UBA5Q9GZZ9 404 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 UNC93B1Q9H1C4 597 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 HOMER2Q9NSB8 354 aa14.12□□□□□ -0.15
HMGB2-201ENST00000296503 PLXNB2O15031 1838 aa14.11□□□□□ -0.15
HMGB2-201ENST00000296503 PRC1O43663 620 aa14.11□□□□□ -0.15
HMGB2-201ENST00000296503 COBLO75128 1261 aa14.11□□□□□ -0.15
HMGB2-201ENST00000296503 HOXC6P09630 235 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms