RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 TFAP4Q01664 338 aa18.78■□□□□ 0.6
RPN1-201ENST00000296255 SMARCC1Q92922 1105 aaPredicted RBP18.78■□□□□ 0.6
RPN1-201ENST00000296255 KAT14Q9H8E8 782 aa18.78■□□□□ 0.6
RPN1-201ENST00000296255 ZCCHC17Q9NP64 241 aaKnown RBP18.78■□□□□ 0.6
RPN1-201ENST00000296255 MAST2Q6P0Q8 1798 aa18.78■□□□□ 0.6
RPN1-201ENST00000296255 TRIM49BA6NDI0 452 aa18.78■□□□□ 0.6
RPN1-201ENST00000296255 CYP26C1Q6V0L0 522 aa18.78■□□□□ 0.6
RPN1-201ENST00000296255 ADSSL1Q8N142 457 aa18.78■□□□□ 0.6
RPN1-201ENST00000296255 TMEM60Q9H2L4 133 aa18.78■□□□□ 0.6
RPN1-201ENST00000296255 SH3GLB2Q9NR46 395 aa18.78■□□□□ 0.6
RPN1-201ENST00000296255 DISC1Q9NRI5 854 aa18.78■□□□□ 0.6
RPN1-201ENST00000296255 CTAGE9A4FU28 777 aa18.77■□□□□ 0.6
RPN1-201ENST00000296255 PMS1P54277 932 aaKnown RBP18.77■□□□□ 0.6
RPN1-201ENST00000296255 SMC1AQ14683 1233 aaKnown RBP18.77■□□□□ 0.6
RPN1-201ENST00000296255 LONRF2Q1L5Z9 754 aa18.77■□□□□ 0.6
RPN1-201ENST00000296255 KIF4BQ2VIQ3 1234 aa18.77■□□□□ 0.6
RPN1-201ENST00000296255 CCDC24Q8N4L8 307 aa18.77■□□□□ 0.6
RPN1-201ENST00000296255 PNMA1Q8ND90 353 aa18.77■□□□□ 0.6
RPN1-201ENST00000296255 DYNLL2Q96FJ2 89 aa18.77■□□□□ 0.6
RPN1-201ENST00000296255 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.77■□□□□ 0.6
RPN1-201ENST00000296255 MKRN1Q9UHC7 482 aaKnown RBP18.77■□□□□ 0.6
RPN1-201ENST00000296255 CCDC88AQ3V6T2 1871 aa18.77■□□□□ 0.6
RPN1-201ENST00000296255 CCDC151A5D8V7 595 aa18.77■□□□□ 0.59
RPN1-201ENST00000296255 OAS2P29728 719 aaKnown RBP18.77■□□□□ 0.59
RPN1-201ENST00000296255 KRT9P35527 623 aa18.77■□□□□ 0.59
RPN1-201ENST00000296255 UBXN1Q04323 297 aa18.77■□□□□ 0.59
RPN1-201ENST00000296255 CEP112Q8N8E3 955 aa18.77■□□□□ 0.59
RPN1-201ENST00000296255 CHP1Q99653 195 aa18.77■□□□□ 0.59
RPN1-201ENST00000296255 SLF1Q9BQI6 1058 aa18.77■□□□□ 0.59
RPN1-201ENST00000296255 PARP1P09874 1014 aaKnown RBP18.76■□□□□ 0.59
RPN1-201ENST00000296255 TRIM14Q14142 442 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 C12orf60Q5U649 245 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 JAKMIP3Q5VZ66 844 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 WWC2Q6AWC2 1192 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 ANKRD20A12PQ8NF67 263 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 LRRC15Q8TF66 581 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 PNKPQ96T60 521 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 MAD2L2Q9UI95 211 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 PCDHA6Q9UN73 950 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 REXO2Q9Y3B8 237 aaKnown RBP18.76■□□□□ 0.59
RPN1-201ENST00000296255 PCDHA8Q9Y5H6 950 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 AHDC1Q5TGY3 1603 aaPredicted RBP18.76■□□□□ 0.59
RPN1-201ENST00000296255 SPATA31A5Q5VU36 1347 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 SPATA31A7Q8IWB4 1347 aa18.76■□□□□ 0.59
RPN1-201ENST00000296255 H7C1D1 291 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 GRM4Q14833 912 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 BRD3Q15059 726 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 DGKHQ86XP1 1220 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 ANKS1AQ92625 1134 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 ANKRD2Q9GZV1 360 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 IRS2Q9Y4H2 1338 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 USP17L3A6NCW0 530 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 USP17L4A6NCW7 530 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 CYTH3O43739 400 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 KLRC4O43908 158 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 DTHD1Q6ZMT9 781 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 USP17L1Q7RTZ2 530 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 PLIN2Q99541 437 aa18.75■□□□□ 0.59
RPN1-201ENST00000296255 TTC26A0AVF1 554 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 TUBB2AQ13885 445 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 MSANTD4Q8NCY6 345 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 NLRP3Q96P20 1036 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 NAPGQ99747 312 aaPredicted RBP18.74■□□□□ 0.59
RPN1-201ENST00000296255 TUBB2BQ9BVA1 445 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 SRP68Q9UHB9 627 aaKnown RBP18.74■□□□□ 0.59
RPN1-201ENST00000296255 CCDC194A0A1B0GVG4 234 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 MAP2K7O14733 419 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 INF2Q27J81 1249 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 DZIP1Q86YF9 867 aaKnown RBP18.74■□□□□ 0.59
RPN1-201ENST00000296255 MB21D1Q8N884 522 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 TRIM10Q9UDY6 481 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 RAB21Q9UL25 225 aa18.74■□□□□ 0.59
RPN1-201ENST00000296255 ST5P78524 1137 aa18.73■□□□□ 0.59
RPN1-201ENST00000296255 TAF3Q5VWG9 929 aa18.73■□□□□ 0.59
RPN1-201ENST00000296255 ZNF507Q8TCN5 953 aa18.73■□□□□ 0.59
RPN1-201ENST00000296255 SH3RF3Q8TEJ3 882 aaPredicted RBP18.73■□□□□ 0.59
RPN1-201ENST00000296255 ZNF831Q5JPB2 1677 aa18.73■□□□□ 0.59
RPN1-201ENST00000296255 LGALS16A8MUM7 142 aa18.73■□□□□ 0.59
RPN1-201ENST00000296255 USP5P45974 858 aa18.73■□□□□ 0.59
RPN1-201ENST00000296255 KCNB1Q14721 858 aa18.73■□□□□ 0.59
RPN1-201ENST00000296255 BEND6Q5SZJ8 279 aaPredicted RBP18.73■□□□□ 0.59
RPN1-201ENST00000296255 HNRNPLLQ8WVV9 542 aaKnown RBP18.73■□□□□ 0.59
RPN1-201ENST00000296255 KBTBD4Q9NVX7 518 aa18.73■□□□□ 0.59
RPN1-201ENST00000296255 EPN1Q9Y6I3 576 aaPredicted RBP18.73■□□□□ 0.59
RPN1-201ENST00000296255 KDM4FA0A1W2PPD8 638 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 STXBP3O00186 592 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 NDUFA10O95299 355 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 TM4SF1P30408 202 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 AMPD2Q01433 879 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 HEATR3Q7Z4Q2 680 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 NBPF5PQ86XG9 351 aaPredicted RBP18.72■□□□□ 0.59
RPN1-201ENST00000296255 DAGLBQ8NCG7 672 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 MYO1AQ9UBC5 1043 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 CCDC66A2RUB6 948 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 H3BQF6 201 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 GRIK5Q16478 980 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 SLC44A5Q8NCS7 719 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 DNAJC7Q99615 494 aa18.72■□□□□ 0.59
RPN1-201ENST00000296255 CCSER1Q9C0I3 900 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms