RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CNTNAP5Q8WYK1 1306 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 PTPDC1A2A3K4 754 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 CETPP11597 493 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 IFNAR1P17181 557 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 STAT2P52630 851 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 PPP2R5BQ15173 497 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 SYDE2Q5VT97 1194 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 CATSPERGQ6ZRH7 1159 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 FASTKD5Q7L8L6 764 aaKnown RBP17.58■□□□□ 0.4
CCDC140-201ENST00000295226 HOMER1Q86YM7 354 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 PROCA1Q8NCQ7 364 aaPredicted RBP17.58■□□□□ 0.4
CCDC140-201ENST00000295226 CCDC102AQ96A19 550 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 JMJD4Q9H9V9 463 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 FEM1BQ9UK73 627 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 PRR12Q9ULL5 1215 aa17.58■□□□□ 0.4
CCDC140-201ENST00000295226 USP17L15C9J2P7 530 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 BTBD19C9JJ37 291 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 USP17L13C9JLJ4 530 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 USP17L11C9JVI0 530 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 USP17L18D6R9N7 530 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 USP17L22D6RA61 530 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 USP17L17D6RBQ6 530 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 USP17L19D6RCP7 530 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 USP17L20D6RJB6 530 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 AOC2O75106 756 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 FDPSP14324 419 aaKnown RBP17.57■□□□□ 0.4
CCDC140-201ENST00000295226 FOSBP53539 338 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 SSRP1Q08945 709 aaKnown RBP17.57■□□□□ 0.4
CCDC140-201ENST00000295226 USP17L24Q0WX57 530 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 HHIPL1Q96JK4 782 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 AIFM3Q96NN9 605 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 PIGSQ96S52 555 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 AGTPBP1Q9UPW5 1226 aa17.57■□□□□ 0.4
CCDC140-201ENST00000295226 LOC285556D6RIA3 1793 aa17.56■□□□□ 0.4
CCDC140-201ENST00000295226 RASSF10A6NK89 507 aa17.56■□□□□ 0.4
CCDC140-201ENST00000295226 PEX10O60683 326 aa17.56■□□□□ 0.4
CCDC140-201ENST00000295226 TAL1P17542 331 aaPredicted RBP17.56■□□□□ 0.4
CCDC140-201ENST00000295226 CPLX2Q6PUV4 134 aaKnown RBP17.56■□□□□ 0.4
CCDC140-201ENST00000295226 BTNL9Q6UXG8 535 aa17.56■□□□□ 0.4
CCDC140-201ENST00000295226 FAM43AQ8N2R8 423 aa17.56■□□□□ 0.4
CCDC140-201ENST00000295226 CHURC1Q8WUH1 139 aa17.56■□□□□ 0.4
CCDC140-201ENST00000295226 CAPNS2Q96L46 248 aa17.56■□□□□ 0.4
CCDC140-201ENST00000295226 LZTS2Q9BRK4 669 aa17.56■□□□□ 0.4
CCDC140-201ENST00000295226 RIOX1Q9H6W3 641 aa17.56■□□□□ 0.4
CCDC140-201ENST00000295226 ORC3Q9UBD5 711 aaPredicted RBP17.56■□□□□ 0.4
CCDC140-201ENST00000295226 FMNL1O95466 1100 aaPredicted RBP17.55■□□□□ 0.4
CCDC140-201ENST00000295226 GJB2P29033 226 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 NFKBIBQ15653 356 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 SMARCC2Q8TAQ2 1214 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 ATG4CQ96DT6 458 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 P2RX7Q99572 595 aaKnown RBP17.55■□□□□ 0.4
CCDC140-201ENST00000295226 SLF1Q9BQI6 1058 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 LLPHQ9BRT6 129 aaKnown RBP17.55■□□□□ 0.4
CCDC140-201ENST00000295226 SPZ1Q9BXG8 430 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 ASCC2Q9H1I8 757 aaPredicted RBP17.55■□□□□ 0.4
CCDC140-201ENST00000295226 SMC3Q9UQE7 1217 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.55■□□□□ 0.4
CCDC140-201ENST00000295226 CDKL5O76039 1030 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 KIF23Q02241 960 aaPredicted RBP17.55■□□□□ 0.4
CCDC140-201ENST00000295226 COG2Q14746 738 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 PKN1Q16512 942 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 CCDC174Q6PII3 467 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 POTEEQ6S8J3 1075 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 FAM160B2Q86V87 743 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
CCDC140-201ENST00000295226 GJB4Q9NTQ9 266 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 PPP1R9AQ9ULJ8 1098 aa17.55■□□□□ 0.4
CCDC140-201ENST00000295226 RLFQ13129 1914 aa17.54■□□□□ 0.4
CCDC140-201ENST00000295226 MANSC4A6NHS7 340 aaPredicted RBP17.54■□□□□ 0.4
CCDC140-201ENST00000295226 PDHXO00330 501 aa17.54■□□□□ 0.4
CCDC140-201ENST00000295226 IGF2BP3O00425 579 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCDC140-201ENST00000295226 PRPF3O43395 683 aaKnown RBP17.54■□□□□ 0.4
CCDC140-201ENST00000295226 CYP2C8P10632 490 aa17.54■□□□□ 0.4
CCDC140-201ENST00000295226 HOXA7P31268 230 aaPredicted RBP17.54■□□□□ 0.4
CCDC140-201ENST00000295226 C1QTNF8P60827 252 aa17.54■□□□□ 0.4
CCDC140-201ENST00000295226 INTS4Q96HW7 963 aaKnown RBP17.54■□□□□ 0.4
CCDC140-201ENST00000295226 SMCHD1A6NHR9 2005 aa17.54■□□□□ 0.4
CCDC140-201ENST00000295226 TESPA1A2RU30 521 aaPredicted RBP17.53■□□□□ 0.4
CCDC140-201ENST00000295226 PLA2G6O60733 806 aa17.53■□□□□ 0.4
CCDC140-201ENST00000295226 PPP1R11O60927 126 aaPredicted RBP17.53■□□□□ 0.4
CCDC140-201ENST00000295226 SMARCA1P28370 1054 aa17.53■□□□□ 0.4
CCDC140-201ENST00000295226 DSG3P32926 999 aa17.53■□□□□ 0.4
CCDC140-201ENST00000295226 IRX3P78415 501 aaPredicted RBP17.53■□□□□ 0.4
CCDC140-201ENST00000295226 AKAP17AQ02040 695 aaKnown RBP17.53■□□□□ 0.4
CCDC140-201ENST00000295226 CDC37Q16543 378 aaPredicted RBP17.53■□□□□ 0.4
CCDC140-201ENST00000295226 TRIM22Q8IYM9 498 aa17.53■□□□□ 0.4
CCDC140-201ENST00000295226 GPKOWQ92917 476 aaPredicted RBP eCLIP17.53■□□□□ 0.4
CCDC140-201ENST00000295226 RRP36Q96EU6 259 aaKnown RBP17.53■□□□□ 0.4
CCDC140-201ENST00000295226 RNF26Q9BY78 433 aaPredicted RBP17.53■□□□□ 0.4
CCDC140-201ENST00000295226 MYH6P13533 1939 aa17.53■□□□□ 0.4
CCDC140-201ENST00000295226 PARP14Q460N5 1801 aa17.53■□□□□ 0.4
CCDC140-201ENST00000295226 SPDYE16A6NNV3 312 aaPredicted RBP17.52■□□□□ 0.4
CCDC140-201ENST00000295226 VEGFBP49765 207 aa17.52■□□□□ 0.4
CCDC140-201ENST00000295226 QRICH1Q2TAL8 776 aa17.52■□□□□ 0.4
CCDC140-201ENST00000295226 MTMR8Q96EF0 704 aa17.52■□□□□ 0.4
CCDC140-201ENST00000295226 VWA5AO00534 786 aa17.52■□□□□ 0.39
CCDC140-201ENST00000295226 OTUD7BQ6GQQ9 843 aa17.52■□□□□ 0.39
CCDC140-201ENST00000295226 ANKRD23Q86SG2 305 aa17.52■□□□□ 0.39
CCDC140-201ENST00000295226 CPXCR1Q8N123 301 aa17.52■□□□□ 0.39
CCDC140-201ENST00000295226 FAM184AQ8NB25 1140 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms