RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 WDR64B1ANS9 1081 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 LIG3P49916 1009 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 FAM98CQ17RN3 349 aaKnown RBP13.62□□□□□ -0.23
SLX4-201ENST00000294008 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.62□□□□□ -0.231e-7■■■■■ 35.3
SLX4-201ENST00000294008 DENND2AQ9ULE3 1009 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 PLEKHH2Q8IVE3 1493 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 PLCD1P51178 756 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 GDAP1L1Q96MZ0 367 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 SLC38A10Q9HBR0 1119 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 RIC8AQ9NPQ8 531 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 SLC4A7Q9Y6M7 1214 aa13.62□□□□□ -0.23
SLX4-201ENST00000294008 YWHAGP61981 247 aaKnown RBP eCLIP13.61□□□□□ -0.23
SLX4-201ENST00000294008 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
SLX4-201ENST00000294008 GLE1Q53GS7 698 aaKnown RBP13.61□□□□□ -0.23
SLX4-201ENST00000294008 IGSF22Q8N9C0 903 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 DNAAF3Q8N9W5 541 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 ANKRD50Q9ULJ7 1429 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 K7ENM7 598 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 RNF113AO15541 343 aaKnown RBP13.61□□□□□ -0.23
SLX4-201ENST00000294008 ARL4DP49703 201 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 PDE1BQ01064 536 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 ADCY1Q08828 1119 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 TAF5LO75529 589 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 UBE3AQ05086 875 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 KLHL30Q0D2K2 578 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 THOC5Q13769 683 aaKnown RBP13.61□□□□□ -0.23
SLX4-201ENST00000294008 IFT20Q8IY31 132 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 RHPN1Q8TCX5 695 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 NLRP7Q8WX94 980 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 PTPRCP08575 1304 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 MYOM3Q5VTT5 1437 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 A0A1B0GUA9 196 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 FLOT2Q14254 428 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 ACCSLQ4AC99 568 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 MAP3K21Q5TCX8 1036 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 SLC17A8Q8NDX2 589 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 CFAP36Q96G28 342 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 DOLKQ9UPQ8 538 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 ZNF263O14978 683 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 MYL1P05976 194 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 CENPAP49450 140 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 NLRC4Q9NPP4 1024 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 SLC52A1Q9NWF4 448 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 V9GY48 417 aaPredicted RBP13.61□□□□□ -0.23
SLX4-201ENST00000294008 CAMSAP2Q08AD1 1489 aa13.61□□□□□ -0.23
SLX4-201ENST00000294008 RARSP54136 660 aaKnown RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 SKOR1P84550 965 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 SNX1Q13596 522 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 EEPD1Q7L9B9 569 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 NCLNQ969V3 563 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 TEKT1Q969V4 418 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 DNAJC8O75937 253 aaPredicted RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 PDE6BP35913 854 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 DOK7Q18PE1 504 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 NFATC2IPQ8NCF5 419 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 AFF4Q9UHB7 1163 aaKnown RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 PTPN22Q9Y2R2 807 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 HIP1RO75146 1068 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 FBLN1P23142 703 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 EEF1GP26641 437 aaKnown RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 PMLP29590 882 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 IL15P40933 162 aaPredicted RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 SH3KBP1Q96B97 665 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 LSM14BQ9BX40 385 aaKnown RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 FRMD3A2A2Y4 597 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 N4BP1O75113 896 aaKnown RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 SRGAP2BP0DMP2 458 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 GOLGA5Q8TBA6 731 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 P3H4Q92791 437 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 FMNL1O95466 1100 aaPredicted RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 BRD1O95696 1058 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 RASSF2P50749 326 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 TTC19Q6DKK2 380 aaPredicted RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 SUPT20HQ8NEM7 779 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 SECISBP2LQ93073 1101 aaKnown RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 CSRNP1Q96S65 589 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 SEPT9Q9UHD8 586 aaPredicted RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 SGK1O00141 431 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 PRPF4O43172 522 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLX4-201ENST00000294008 CAPZA2P47755 286 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 SCNN1DP51172 638 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 TYW1BQ6NUM6 668 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 CCDC127Q96BQ5 260 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 GEMIN8Q9NWZ8 242 aaKnown RBP13.6□□□□□ -0.23
SLX4-201ENST00000294008 ELP1O95163 1332 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 RAD50Q92878 1312 aa13.6□□□□□ -0.23
SLX4-201ENST00000294008 CTDSPL2Q05D32 466 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 PABPC4Q13310 644 aaKnown RBP eCLIP13.59□□□□□ -0.23
SLX4-201ENST00000294008 VMP1Q96GC9 406 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 BLZF1Q9H2G9 400 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 DDX41Q9UJV9 622 aaKnown RBP13.59□□□□□ -0.23
SLX4-201ENST00000294008 OSTNP61366 133 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 FRA10AC1Q70Z53 315 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
SLX4-201ENST00000294008 TMX3Q96JJ7 454 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 POC1B-GALNT4F8VUJ3 575 aa13.59□□□□□ -0.23
SLX4-201ENST00000294008 B4GALNT4Q76KP1 1039 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms