RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 TSPY2A6NKD2 308 aa16.48■□□□□ 0.23
CCNF-201ENST00000293968 CT47A1Q5JQC4 288 aaPredicted RBP16.48■□□□□ 0.23
CCNF-201ENST00000293968 REXO2Q9Y3B8 237 aaKnown RBP16.48■□□□□ 0.23
CCNF-201ENST00000293968 VEGFAP15692 232 aaPredicted RBP16.48■□□□□ 0.23
CCNF-201ENST00000293968 CXCR5P32302 372 aa16.48■□□□□ 0.23
CCNF-201ENST00000293968 IPO4Q8TEX9 1081 aaKnown RBP16.48■□□□□ 0.23
CCNF-201ENST00000293968 CCDC42Q96M95 316 aa16.48■□□□□ 0.23
CCNF-201ENST00000293968 SIPA1L3O60292 1781 aaPredicted RBP16.48■□□□□ 0.23
CCNF-201ENST00000293968 CCT5P48643 541 aa16.48■□□□□ 0.23
CCNF-201ENST00000293968 ATP2C1P98194 919 aaPredicted RBP16.48■□□□□ 0.23
CCNF-201ENST00000293968 RBM28Q9NW13 759 aaKnown RBP16.48■□□□□ 0.23
CCNF-201ENST00000293968 CDHR2Q9BYE9 1310 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 H7C1D1 291 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 PMS1P54277 932 aaKnown RBP16.47■□□□□ 0.23
CCNF-201ENST00000293968 SLC7A5Q01650 507 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 EHBP1Q8NDI1 1231 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 SELENOOQ9BVL4 669 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 HPCAL4Q9UM19 191 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 SCN11AQ9UI33 1791 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 DTHD1Q6ZMT9 781 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 ANKRD13CQ8N6S4 541 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 CCDC47Q96A33 483 aaKnown RBP16.47■□□□□ 0.23
CCNF-201ENST00000293968 TMEM94Q12767 1356 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 HERVK_113P62684 666 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 TYW1BQ6NUM6 668 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 TRAPPC11Q7Z392 1133 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 SRBD1Q8N5C6 995 aaKnown RBP16.47■□□□□ 0.23
CCNF-201ENST00000293968 MTRQ99707 1265 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 LACRTQ9GZZ8 138 aa16.47■□□□□ 0.23
CCNF-201ENST00000293968 SCG2P13521 617 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 AMPD2Q01433 879 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 KRT26Q7Z3Y9 468 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 NHEJ1Q9H9Q4 299 aaPredicted RBP16.46■□□□□ 0.23
CCNF-201ENST00000293968 POLD4Q9HCU8 107 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 LIG3P49916 1009 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 ENOX2Q16206 610 aaKnown RBP16.46■□□□□ 0.23
CCNF-201ENST00000293968 IQCEQ6IPM2 695 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 TUBGCP2Q9BSJ2 902 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 ASIC1P78348 528 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 EVX2Q03828 476 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 SEC23AQ15436 765 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 SECISBP2LQ93073 1101 aaKnown RBP16.46■□□□□ 0.23
CCNF-201ENST00000293968 NOC4LQ9BVI4 516 aaKnown RBP16.46■□□□□ 0.23
CCNF-201ENST00000293968 SMARCAL1Q9NZC9 954 aa16.46■□□□□ 0.23
CCNF-201ENST00000293968 MAGEA9P43362 315 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 TMTC3Q6ZXV5 915 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 HEATR3Q7Z4Q2 680 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 COG1Q8WTW3 980 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 LRWD1Q9UFC0 647 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 FER1L4A9Z1Z3 1794 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 LGALS16A8MUM7 142 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 AKR1B10O60218 316 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 SYF2O95926 243 aaKnown RBP16.45■□□□□ 0.22
CCNF-201ENST00000293968 MYBL2P10244 700 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 CHRNDQ07001 517 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 PDXDC2PQ6P474 469 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 FAM207AQ9NSI2 230 aaPredicted RBP16.45■□□□□ 0.22
CCNF-201ENST00000293968 WTIPA6NIX2 430 aaPredicted RBP16.45■□□□□ 0.22
CCNF-201ENST00000293968 ZPR1O75312 459 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 PPFIA4O75335 1185 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 CALM1P0DP23 149 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 CALM2P0DP24 149 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 CALM3P0DP25 149 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 PDE4DQ08499 809 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 CCDC152Q4G0S7 254 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 PYM1Q9BRP8 204 aaKnown RBP16.45■□□□□ 0.22
CCNF-201ENST00000293968 TANGO6Q9C0B7 1094 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 MMRN2Q9H8L6 949 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 EXOC1Q9NV70 894 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 ADAMTS3O15072 1205 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 FGFR2P21802 821 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 IL17AQ16552 155 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 INF2Q27J81 1249 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 WDR93Q6P2C0 686 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 CADPS2Q86UW7 1296 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 PPM1EQ8WY54 764 aa16.45■□□□□ 0.22
CCNF-201ENST00000293968 USO1O60763 962 aaKnown RBP16.44■□□□□ 0.22
CCNF-201ENST00000293968 PPP2R5BQ15173 497 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 EZH2Q15910 746 aaKnown RBP16.44■□□□□ 0.22
CCNF-201ENST00000293968 ATRNO75882 1429 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 PSMD14O00487 310 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 E2F4Q16254 413 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 PACS2Q86VP3 889 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 C2CD5Q86YS7 1000 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 EHD4Q9H223 541 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 SPATA31A3Q5VYP0 1347 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 TNS3Q68CZ2 1445 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 SHTN1A0MZ66 631 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 EBAG9O00559 213 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 BICDL1Q6ZP65 573 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 CENPHQ9H3R5 247 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 SAMM50Q9Y512 469 aa16.44■□□□□ 0.22
CCNF-201ENST00000293968 C4AP0C0L4 1744 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 C4BP0C0L5 1744 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 RCCD1A6NED2 376 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 ZEB2O60315 1214 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 KAT14Q9H8E8 782 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 MLXIPQ9HAP2 919 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 PNPLA7Q6ZV29 1317 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms