RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 BRCA2P51587 3418 aa15.68■□□□□ 0.1
VPS28-201ENST00000292510 COL11A1P12107 1806 aaPredicted RBP15.67■□□□□ 0.1
VPS28-201ENST00000292510 CCDC85CA6NKD9 419 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 ZBED4O75132 1171 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 REC8O95072 547 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 STAT3P40763 770 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 SLC4A3P48751 1232 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 ZNF543Q08ER8 600 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 ADCK5Q3MIX3 580 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 SLC9C1Q4G0N8 1177 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 FAM160B2Q86V87 743 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 CPXCR1Q8N123 301 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 CHURC1Q8WUH1 139 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 SLC38A10Q9HBR0 1119 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 RAVER2Q9HCJ3 691 aaKnown RBP15.67■□□□□ 0.1
VPS28-201ENST00000292510 PRR12Q9ULL5 1215 aa15.67■□□□□ 0.1
VPS28-201ENST00000292510 CTDP1Q9Y5B0 961 aaPredicted RBP15.67■□□□□ 0.1
VPS28-201ENST00000292510 ERICH2A1L162 156 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 PRC1O43663 620 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 PLA2G6O60733 806 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 MYCP01106 439 aaPredicted RBP15.66■□□□□ 0.1
VPS28-201ENST00000292510 ELNP15502 786 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 CYP2B6P20813 491 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 WTAPQ15007 396 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 TMEM67Q5HYA8 995 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 MORN1Q5T089 497 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 SNRNP48Q6IEG0 339 aaKnown RBP15.66■□□□□ 0.1
VPS28-201ENST00000292510 RIOX2Q8IUF8 465 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 IGDCC4Q8TDY8 1250 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 NUDT12Q9BQG2 462 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 LRRC2Q9BYS8 371 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 CPVLQ9H3G5 476 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 RIPK3Q9Y572 518 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 PLXNB2O15031 1838 aa15.66■□□□□ 0.1
VPS28-201ENST00000292510 ADCY3O60266 1144 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 ZKSCAN1P17029 563 aaPredicted RBP15.65■□□□□ 0.1
VPS28-201ENST00000292510 TAL1P17542 331 aaPredicted RBP15.65■□□□□ 0.1
VPS28-201ENST00000292510 PTPREP23469 700 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 GRK4P32298 578 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 MCM5P33992 734 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 HSPA4P34932 840 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 IRF5Q13568 498 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 SART3Q15020 963 aaKnown RBP15.65■□□□□ 0.1
VPS28-201ENST00000292510 SYDE2Q5VT97 1194 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 CCDC174Q6PII3 467 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 BTNL9Q6UXG8 535 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 SHCBP1Q8NEM2 672 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 USP6NLQ92738 828 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 TCEANC2Q96MN5 208 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 NEK1Q96PY6 1258 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 TEX13BQ9BXU2 312 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 SNX14Q9Y5W7 946 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 IVNS1ABPQ9Y6Y0 642 aa15.65■□□□□ 0.1
VPS28-201ENST00000292510 SH2B2O14492 632 aaPredicted RBP15.64■□□□□ 0.09
VPS28-201ENST00000292510 SLC25A27O95847 323 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 TSGA10IPQ3SY00 556 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 SOCS4Q8WXH5 440 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 KCNB2Q92953 911 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 ARMC5Q96C12 935 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 ZNF333Q96JL9 665 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 AGBL1Q96MI9 1066 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 USP26Q9BXU7 913 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 UBA5Q9GZZ9 404 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 MROH8Q9H579 483 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 LY9Q9HBG7 655 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 ZNF536O15090 1300 aa15.64■□□□□ 0.09
VPS28-201ENST00000292510 SLC15A5A6NIM6 579 aa15.63■□□□□ 0.09
VPS28-201ENST00000292510 ATP2A1O14983 1001 aa15.63■□□□□ 0.09
VPS28-201ENST00000292510 PARP1P09874 1014 aaKnown RBP15.63■□□□□ 0.09
VPS28-201ENST00000292510 MAP2K5Q13163 448 aa15.63■□□□□ 0.09
VPS28-201ENST00000292510 GRB14Q14449 540 aa15.63■□□□□ 0.09
VPS28-201ENST00000292510 CCL14Q16627 93 aa15.63■□□□□ 0.09
VPS28-201ENST00000292510 STAG2Q8N3U4 1231 aa15.63■□□□□ 0.09
VPS28-201ENST00000292510 SLAIN1Q8ND83 568 aa15.63■□□□□ 0.09
VPS28-201ENST00000292510 MYL10Q9BUA6 226 aa15.63■□□□□ 0.09
VPS28-201ENST00000292510 RANBP17Q9H2T7 1088 aaKnown RBP15.63■□□□□ 0.09
VPS28-201ENST00000292510 HOMER2Q9NSB8 354 aa15.63■□□□□ 0.09
VPS28-201ENST00000292510 BIN2Q9UBW5 565 aaPredicted RBP15.63■□□□□ 0.09
VPS28-201ENST00000292510 COBLO75128 1261 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 FDX1P10109 184 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 CPA1P15085 419 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 ADORA2AP29274 412 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 RGS2P41220 211 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 EXOSC10Q01780 885 aaKnown RBP15.62■□□□□ 0.09
VPS28-201ENST00000292510 TRIM32Q13049 653 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 KRT32Q14532 448 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 MTFR1Q15390 333 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 GPATCH4Q5T3I0 446 aaKnown RBP15.62■□□□□ 0.09
VPS28-201ENST00000292510 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 NPLOC4Q8TAT6 608 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 TRIB2Q92519 343 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 TMEM87BQ96K49 555 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 JAKMIP1Q96N16 626 aaKnown RBP15.62■□□□□ 0.09
VPS28-201ENST00000292510 MAD2L2Q9UI95 211 aa15.62■□□□□ 0.09
VPS28-201ENST00000292510 STRNO43815 780 aa15.61■□□□□ 0.09
VPS28-201ENST00000292510 INHAP05111 366 aa15.61■□□□□ 0.09
VPS28-201ENST00000292510 OAZ1P54368 228 aa15.61■□□□□ 0.09
VPS28-201ENST00000292510 SOX10P56693 466 aa15.61■□□□□ 0.09
VPS28-201ENST00000292510 TROAPQ12815 778 aa15.61■□□□□ 0.09
VPS28-201ENST00000292510 ASPRV1Q53RT3 343 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms