RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CHMP2AO43633 222 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 MBD4O95243 580 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 RPS6KA2Q15349 733 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 HAUS3Q68CZ6 603 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 SRGAP1Q7Z6B7 1085 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 TRIM4Q9C037 500 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 LGR6Q9HBX8 967 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 NLRC4Q9NPP4 1024 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 FRMD3A2A2Y4 597 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 LRRD1A4D1F6 860 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 POSTNQ15063 836 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 TTC38Q5R3I4 469 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 RRAGAQ7L523 313 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 C3P01024 1663 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 GOLGA8KD6RF30 607 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 ST5P78524 1137 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 CXorf38Q8TB03 319 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 TMEM87BQ96K49 555 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 SLC27A2O14975 620 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 IFNB1P01574 187 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 MX2P20592 715 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 SLC12A2P55011 1212 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 DBN1Q16643 649 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 Q9H521 79 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 HELLSQ9NRZ9 838 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 MYO1AQ9UBC5 1043 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 USP31Q70CQ4 1352 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 FCHSD1Q86WN1 690 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 C2CD5Q86YS7 1000 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 CCDC89Q8N998 374 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 NELFBQ8WX92 580 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 STAMQ92783 540 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 DESI2Q9BSY9 194 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 NUCKS1Q9H1E3 243 aaKnown RBP11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 ETF1P62495 437 aaKnown RBP11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 DYMQ7RTS9 669 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 MAIP1Q8WWC4 291 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 SETDB2Q96T68 719 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 PPP1R9AQ9ULJ8 1098 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 SNX14Q9Y5W7 946 aa11.83□□□□□ -0.52
PKNOX1-201ENST00000291547 USP19O94966 1318 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 CCNT1O60563 726 aaKnown RBP11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 DTNBO60941 627 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 LUC7L3O95232 432 aaKnown RBP11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 BSPRYQ5W0U4 402 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 AMFRQ9UKV5 643 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 ANGEL1Q9UNK9 670 aaKnown RBP11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 CTIFO43310 598 aaKnown RBP11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 EXOC3O60645 756 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 CD19P15391 556 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 CCT5P48643 541 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 CUL4BQ13620 913 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 SNCBQ16143 134 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 TRIM58Q8NG06 486 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 OR8K1Q8NGG5 319 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 LRWD1Q9UFC0 647 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 MYO3AQ8NEV4 1616 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 EFCAB8A8MWE9 144 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 NBPF20Q3BBV1 942 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 NELFCDQ8IXH7 590 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 SNX29Q8TEQ0 813 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 PPP4R1Q8TF05 950 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 HVCN1Q96D96 273 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 ARHGEF35A5YM69 484 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 CCDC51Q96ER9 411 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 MED4Q9NPJ6 270 aa11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 LARSQ9P2J5 1176 aaKnown RBP11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 ARHGEF28Q8N1W1 1705 aaKnown RBP11.82□□□□□ -0.52
PKNOX1-201ENST00000291547 MYO5BQ9ULV0 1848 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 BCRP11274 1271 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 ARHGAP4P98171 946 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 LRMPQ12912 555 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 KSR1Q8IVT5 923 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 CCDC13Q8IYE1 715 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 OTUD7AQ8TE49 926 aaPredicted RBP11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 GPCPD1Q9NPB8 672 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 TBC1D7Q9P0N9 293 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 ERBB3P21860 1342 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 KCNK3O14649 394 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 RPSAP08865 295 aaKnown RBP11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 PALM2Q8IXS6 379 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 UHMK1Q8TAS1 419 aaKnown RBP11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 PRPF31Q8WWY3 499 aaKnown RBP11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 EXOC7Q9UPT5 735 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 HYOU1Q9Y4L1 999 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 TNS3Q68CZ2 1445 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 KRIT1O00522 736 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 LDHBP07195 334 aaKnown RBP11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 ZBTB17Q13105 803 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 CDC37L1Q7L3B6 337 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 CCDC125Q86Z20 511 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 SLC52A2Q9HAB3 445 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 TTLL3Q9Y4R7 772 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 VPS41P49754 854 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 BIRC2Q13490 618 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 HSP90AA5PQ58FG0 334 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms