RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 KLRC3Q07444 240 aa10.57□□□□□ -0.72
TFF1-201ENST00000291527 TMEM63BQ5T3F8 832 aa10.57□□□□□ -0.72
TFF1-201ENST00000291527 LRRC47Q8N1G4 583 aaKnown RBP10.57□□□□□ -0.72
TFF1-201ENST00000291527 MB21D1Q8N884 522 aa10.57□□□□□ -0.72
TFF1-201ENST00000291527 PI4K2BQ8TCG2 481 aa10.57□□□□□ -0.72
TFF1-201ENST00000291527 CEP95Q96GE4 821 aa10.57□□□□□ -0.72
TFF1-201ENST00000291527 KANSL2Q9H9L4 492 aa10.57□□□□□ -0.72
TFF1-201ENST00000291527 RAVER2Q9HCJ3 691 aaKnown RBP10.57□□□□□ -0.72
TFF1-201ENST00000291527 PRDM5Q9NQX1 630 aaPredicted RBP10.57□□□□□ -0.72
TFF1-201ENST00000291527 ROBO3Q96MS0 1386 aa10.56□□□□□ -0.72
TFF1-201ENST00000291527 TLE2Q04725 743 aa10.56□□□□□ -0.72
TFF1-201ENST00000291527 SNX17Q15036 470 aa10.56□□□□□ -0.72
TFF1-201ENST00000291527 ABRAQ8N0Z2 381 aa10.56□□□□□ -0.72
TFF1-201ENST00000291527 CPXCR1Q8N123 301 aa10.56□□□□□ -0.72
TFF1-201ENST00000291527 APPBP2Q92624 585 aa10.56□□□□□ -0.72
TFF1-201ENST00000291527 TINF2Q9BSI4 451 aa10.56□□□□□ -0.72
TFF1-201ENST00000291527 NYAP2Q9P242 653 aa10.56□□□□□ -0.72
TFF1-201ENST00000291527 DNAJC25-GNG10A0A024R161 153 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 NMT2O60551 498 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 MSCO60682 206 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 ADAMTS4O75173 837 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 SLC25A27O95847 323 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 CNTN2Q02246 1040 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 CTDSPL2Q05D32 466 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 VPS53Q5VIR6 699 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 SNRNP48Q6IEG0 339 aaKnown RBP10.55□□□□□ -0.72
TFF1-201ENST00000291527 IFNL3Q8IZI9 196 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 ARRDC4Q8NCT1 418 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 KIFC2Q96AC6 838 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
TFF1-201ENST00000291527 SLF1Q9BQI6 1058 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 TTYH1Q9H313 450 aaPredicted RBP10.55□□□□□ -0.72
TFF1-201ENST00000291527 MKNK2Q9HBH9 465 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 GOPCQ9HD26 462 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 XPNPEP3Q9NQH7 507 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 MTMR4Q9NYA4 1195 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 ARPP21Q9UBL0 812 aaPredicted RBP10.55□□□□□ -0.72
TFF1-201ENST00000291527 PHF24Q9UPV7 400 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 ASTN1O14525 1302 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 SALL3Q9BXA9 1300 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 MUC3AQ02505 3323 aa10.55□□□□□ -0.72
TFF1-201ENST00000291527 A0A1W2PQ45 241 aaPredicted RBP10.54□□□□□ -0.72
TFF1-201ENST00000291527 A0A1W2PQY0 241 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 LRRC37A2A6NM11 1700 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 PATL2C9JE40 543 aaKnown RBP10.54□□□□□ -0.72
TFF1-201ENST00000291527 KBTBD13C9JR72 458 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 CCSAPQ6IQ19 270 aaPredicted RBP10.54□□□□□ -0.72
TFF1-201ENST00000291527 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 GBF1Q92538 1859 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 KATNBL1Q9H079 304 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 SH2D4AQ9H788 454 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 IL17RBQ9NRM6 502 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 STXBP5LQ9Y2K9 1186 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 ZNF536O15090 1300 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 SYNRGQ9UMZ2 1314 aa10.54□□□□□ -0.72
TFF1-201ENST00000291527 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.53□□□□□ -0.72
TFF1-201ENST00000291527 CTAGE5O15320 804 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 PQBP1O60828 265 aaKnown RBP10.53□□□□□ -0.72
TFF1-201ENST00000291527 APPP05067 770 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 TDO2P48775 406 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 FAAP100Q0VG06 881 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 KCTD2Q14681 263 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 KCNA10Q16322 511 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 ZMYM1Q5SVZ6 1142 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 FAM109BQ6ICB4 259 aaPredicted RBP10.53□□□□□ -0.72
TFF1-201ENST00000291527 ZSCAN25Q6NSZ9 544 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 KLHDC9Q8NEP7 349 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 MKL1Q969V6 931 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 LBHD1Q9BQE6 289 aaPredicted RBP10.53□□□□□ -0.72
TFF1-201ENST00000291527 SLC38A10Q9HBR0 1119 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 HOMER2Q9NSB8 354 aa10.53□□□□□ -0.72
TFF1-201ENST00000291527 SOWAHBA6NEL2 793 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 RARBP10826 455 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 MCCP23508 829 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 TFAP4Q01664 338 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 MUM1L1Q5H9M0 696 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 SLFN13Q68D06 897 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 GIMAP6Q6P9H5 292 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 C16orf59Q7L2K0 433 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 AMOTL1Q8IY63 956 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 ZNF444Q8N0Y2 327 aaPredicted RBP10.52□□□□□ -0.73
TFF1-201ENST00000291527 PRPF38AQ8NAV1 312 aaKnown RBP10.52□□□□□ -0.73
TFF1-201ENST00000291527 NEDD1Q8NHV4 660 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 DDRGK1Q96HY6 314 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 CRBNQ96SW2 442 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 TEX13BQ9BXU2 312 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 SEMA6BQ9H3T3 888 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.52□□□□□ -0.73
TFF1-201ENST00000291527 ZHX1Q9UKY1 873 aaPredicted RBP10.52□□□□□ -0.73
TFF1-201ENST00000291527 MTMR7Q9Y216 660 aa10.52□□□□□ -0.73
TFF1-201ENST00000291527 DIS3Q9Y2L1 958 aaKnown RBP10.52□□□□□ -0.73
TFF1-201ENST00000291527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.52□□□□□ -0.73
TFF1-201ENST00000291527 TMEM232C9JQI7 657 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 NEFLP07196 543 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 ACLYP53396 1101 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 BEX3Q00994 111 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 PPARAQ07869 468 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 ACVR2BQ13705 512 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 CCDC144BQ3MJ40 725 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms