RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 DOCK3Q8IZD9 2030 aa31.48■■■□□ 2.63
SSU72-201ENST00000291386 TNPO2O14787 897 aaKnown RBP31.47■■■□□ 2.63
SSU72-201ENST00000291386 ZBED4O75132 1171 aa31.47■■■□□ 2.63
SSU72-201ENST00000291386 ASPRV1Q53RT3 343 aa31.47■■■□□ 2.63
SSU72-201ENST00000291386 SAMD1Q6SPF0 538 aaPredicted RBP31.47■■■□□ 2.63
SSU72-201ENST00000291386 CHMP4CQ96CF2 233 aa31.47■■■□□ 2.63
SSU72-201ENST00000291386 MOV10L1Q9BXT6 1211 aaKnown RBP31.47■■■□□ 2.63
SSU72-201ENST00000291386 PORCNQ9H237 461 aa31.47■■■□□ 2.63
SSU72-201ENST00000291386 SRRDQ9UH36 339 aa31.47■■■□□ 2.63
SSU72-201ENST00000291386 ISY1Q9ULR0 285 aaKnown RBP31.47■■■□□ 2.63
SSU72-201ENST00000291386 PTPN22Q9Y2R2 807 aa31.47■■■□□ 2.63
SSU72-201ENST00000291386 FRMPD2Q68DX3 1309 aaPredicted RBP31.47■■■□□ 2.63
SSU72-201ENST00000291386 PSMA5P28066 241 aa31.46■■■□□ 2.63
SSU72-201ENST00000291386 OAZ1P54368 228 aa31.46■■■□□ 2.63
SSU72-201ENST00000291386 TTBK2Q6IQ55 1244 aa31.46■■■□□ 2.63
SSU72-201ENST00000291386 FBXO46Q6PJ61 603 aaPredicted RBP31.46■■■□□ 2.63
SSU72-201ENST00000291386 COA7Q96BR5 231 aa31.46■■■□□ 2.63
SSU72-201ENST00000291386 JAKMIP1Q96N16 626 aaKnown RBP31.46■■■□□ 2.63
SSU72-201ENST00000291386 MCOLN1Q9GZU1 580 aa31.46■■■□□ 2.63
SSU72-201ENST00000291386 PRR12Q9ULL5 1215 aa31.46■■■□□ 2.63
SSU72-201ENST00000291386 SEC24BO95487 1268 aa31.45■■■□□ 2.63
SSU72-201ENST00000291386 TROAPQ12815 778 aa31.45■■■□□ 2.63
SSU72-201ENST00000291386 IKQ13123 557 aaPredicted RBP31.45■■■□□ 2.63
SSU72-201ENST00000291386 GPCPD1Q9NPB8 672 aa31.45■■■□□ 2.63
SSU72-201ENST00000291386 SLC25A27O95847 323 aa31.44■■■□□ 2.62
SSU72-201ENST00000291386 PARP1P09874 1014 aaKnown RBP31.44■■■□□ 2.62
SSU72-201ENST00000291386 STAT3P40763 770 aa31.44■■■□□ 2.62
SSU72-201ENST00000291386 CATIPQ7Z7H3 387 aa31.44■■■□□ 2.62
SSU72-201ENST00000291386 SGMS1Q86VZ5 419 aa31.44■■■□□ 2.62
SSU72-201ENST00000291386 RIOX2Q8IUF8 465 aa31.44■■■□□ 2.62
SSU72-201ENST00000291386 MAP3K14Q99558 947 aa31.44■■■□□ 2.62
SSU72-201ENST00000291386 GPHNQ9NQX3 736 aaPredicted RBP31.44■■■□□ 2.62
SSU72-201ENST00000291386 ECM2O94769 699 aaPredicted RBP31.43■■■□□ 2.62
SSU72-201ENST00000291386 COPB2P35606 906 aa31.43■■■□□ 2.62
SSU72-201ENST00000291386 PLS1Q14651 629 aa31.43■■■□□ 2.62
SSU72-201ENST00000291386 SYDE2Q5VT97 1194 aa31.43■■■□□ 2.62
SSU72-201ENST00000291386 BLOC1S2Q6QNY1 142 aa31.43■■■□□ 2.62
SSU72-201ENST00000291386 GPR142Q7Z601 462 aa31.43■■■□□ 2.62
SSU72-201ENST00000291386 CCAR1Q8IX12 1150 aaKnown RBP31.43■■■□□ 2.62
SSU72-201ENST00000291386 TEX13BQ9BXU2 312 aa31.43■■■□□ 2.62
SSU72-201ENST00000291386 TM6SF1Q9BZW5 370 aa31.43■■■□□ 2.62
SSU72-201ENST00000291386 MROH8Q9H579 483 aa31.43■■■□□ 2.62
SSU72-201ENST00000291386 PLXNB2O15031 1838 aa31.42■■■□□ 2.62
SSU72-201ENST00000291386 ANAPC15P60006 121 aa31.42■■■□□ 2.62
SSU72-201ENST00000291386 GRM4Q14833 912 aa31.42■■■□□ 2.62
SSU72-201ENST00000291386 PLEKHH3Q7Z736 793 aa31.42■■■□□ 2.62
SSU72-201ENST00000291386 FBXL16Q8N461 479 aa31.42■■■□□ 2.62
SSU72-201ENST00000291386 IL17RAQ96F46 866 aa31.42■■■□□ 2.62
SSU72-201ENST00000291386 LRRC2Q9BYS8 371 aa31.42■■■□□ 2.62
SSU72-201ENST00000291386 RANBP17Q9H2T7 1088 aaKnown RBP31.42■■■□□ 2.62
SSU72-201ENST00000291386 GJD2Q9UKL4 321 aa31.42■■■□□ 2.62
SSU72-201ENST00000291386 CTDP1Q9Y5B0 961 aaPredicted RBP31.42■■■□□ 2.62
SSU72-201ENST00000291386 PALM3A6NDB9 673 aaPredicted RBP31.41■■■□□ 2.62
SSU72-201ENST00000291386 DDAH1O94760 285 aa31.41■■■□□ 2.62
SSU72-201ENST00000291386 GOLGA8HP0CJ92 632 aa31.41■■■□□ 2.62
SSU72-201ENST00000291386 ERCC3P19447 782 aa31.41■■■□□ 2.62
SSU72-201ENST00000291386 SLC16A2P36021 539 aa31.41■■■□□ 2.62
SSU72-201ENST00000291386 ZSWIM6Q9HCJ5 1215 aa31.41■■■□□ 2.62
SSU72-201ENST00000291386 MAD2L2Q9UI95 211 aa31.41■■■□□ 2.62
SSU72-201ENST00000291386 CCDC69A6NI79 296 aa31.4■■■□□ 2.62
SSU72-201ENST00000291386 RPS6KB1P23443 525 aa31.4■■■□□ 2.62
SSU72-201ENST00000291386 PRKCZQ05513 592 aa31.4■■■□□ 2.62
SSU72-201ENST00000291386 IRF5Q13568 498 aa31.4■■■□□ 2.62
SSU72-201ENST00000291386 ZNF654Q8IZM8 581 aa31.4■■■□□ 2.62
SSU72-201ENST00000291386 GABRQQ9UN88 632 aa31.4■■■□□ 2.62
SSU72-201ENST00000291386 ZNF536O15090 1300 aa31.4■■■□□ 2.62
SSU72-201ENST00000291386 CASTP20810 708 aaKnown RBP31.39■■■□□ 2.62
SSU72-201ENST00000291386 SNRNP48Q6IEG0 339 aaKnown RBP31.39■■■□□ 2.62
SSU72-201ENST00000291386 NFXL1Q6ZNB6 911 aa31.39■■■□□ 2.62
SSU72-201ENST00000291386 SOCS4Q8WXH5 440 aa31.39■■■□□ 2.62
SSU72-201ENST00000291386 TCEANC2Q96MN5 208 aa31.39■■■□□ 2.62
SSU72-201ENST00000291386 RAVER2Q9HCJ3 691 aaKnown RBP31.39■■■□□ 2.62
SSU72-201ENST00000291386 STRNO43815 780 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 CPA1P15085 419 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 PTPREP23469 700 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 FLT3LGP49771 235 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 MORN1Q5T089 497 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 CPXCR1Q8N123 301 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 STAG2Q8N3U4 1231 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 USP6NLQ92738 828 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 AGXT2Q9BYV1 514 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 UBA5Q9GZZ9 404 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 PTCH2Q9Y6C5 1203 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 ZNF236Q9UL36 1845 aa31.38■■■□□ 2.61
SSU72-201ENST00000291386 SLC15A5A6NIM6 579 aa31.37■■■□□ 2.61
SSU72-201ENST00000291386 CALM1P0DP23 149 aa31.37■■■□□ 2.61
SSU72-201ENST00000291386 CALM2P0DP24 149 aa31.37■■■□□ 2.61
SSU72-201ENST00000291386 CALM3P0DP25 149 aa31.37■■■□□ 2.61
SSU72-201ENST00000291386 RUFY3Q7L099 469 aa31.37■■■□□ 2.61
SSU72-201ENST00000291386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.37■■■□□ 2.612e-6■■■□□ 17
SSU72-201ENST00000291386 NCAPG2Q86XI2 1143 aa31.37■■■□□ 2.61
SSU72-201ENST00000291386 TNS4Q8IZW8 715 aa31.37■■■□□ 2.61
SSU72-201ENST00000291386 ABRAQ8N0Z2 381 aa31.37■■■□□ 2.61
SSU72-201ENST00000291386 NUDT12Q9BQG2 462 aa31.37■■■□□ 2.61
SSU72-201ENST00000291386 CWC22Q9HCG8 908 aaKnown RBP31.37■■■□□ 2.61
SSU72-201ENST00000291386 SLC12A7Q9Y666 1083 aa31.37■■■□□ 2.61
SSU72-201ENST00000291386 KLRF2D3W0D1 207 aa31.36■■■□□ 2.61
SSU72-201ENST00000291386 GRB14Q14449 540 aa31.36■■■□□ 2.61
SSU72-201ENST00000291386 PNMA2Q9UL42 364 aa31.36■■■□□ 2.61
SSU72-201ENST00000291386 RIPK3Q9Y572 518 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms