RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 KLRF2D3W0D1 207 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 ITGBL1O95965 494 aaPredicted RBP13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 UQCRHP07919 91 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 KRT85P78386 507 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 PKN1Q16512 942 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 CCDC96Q2M329 555 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 LDHDQ86WU2 507 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 CTCFLQ8NI51 663 aaPredicted RBP13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 MKL1Q969V6 931 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 FBXO28Q9NVF7 368 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 SNHG28P0DPA3 235 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 FAM83BQ5T0W9 1011 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 SLFN13Q68D06 897 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 FAM173BQ6P4H8 233 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 FERMT3Q86UX7 667 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 HOMER1Q86YM7 354 aa13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 GPKOWQ92917 476 aaPredicted RBP eCLIP13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 GPBP1L1Q9HC44 474 aaPredicted RBP13.22□□□□□ -0.29
CHRNB3-201ENST00000289957 BRCA2P51587 3418 aa13.21□□□□□ -0.29
CHRNB3-201ENST00000289957 KIF3CO14782 793 aa13.21□□□□□ -0.29
CHRNB3-201ENST00000289957 ADCY5O95622 1261 aa13.21□□□□□ -0.29
CHRNB3-201ENST00000289957 PARP1P09874 1014 aaKnown RBP13.21□□□□□ -0.29
CHRNB3-201ENST00000289957 IFNAR1P17181 557 aa13.21□□□□□ -0.29
CHRNB3-201ENST00000289957 DNM1Q05193 864 aaKnown RBP13.21□□□□□ -0.29
CHRNB3-201ENST00000289957 ZNF543Q08ER8 600 aa13.21□□□□□ -0.29
CHRNB3-201ENST00000289957 TMX2Q9Y320 296 aa13.21□□□□□ -0.29
CHRNB3-201ENST00000289957 VPS37CA5D8V6 355 aaPredicted RBP13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 PEX10O60683 326 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 CELF2O95319 508 aaKnown RBP13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 GJA5P36382 358 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 SLC1A4P43007 532 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 HMGCS2P54868 508 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 TYW1BQ6NUM6 668 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 RBM43Q6ZSC3 357 aaKnown RBP13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 FEZ1Q99689 392 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 MYH6P13533 1939 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 PPP1R12BO60237 982 aaPredicted RBP13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 CCDC192P0DO97 292 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 MAP3K9P80192 1104 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 LARP1BQ659C4 914 aaKnown RBP13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 VPS54Q9P1Q0 977 aa13.2□□□□□ -0.3
CHRNB3-201ENST00000289957 USP17L10C9JJH3 530 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 IRF6O14896 467 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 GTF2F1P35269 517 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 CCDC178Q5BJE1 867 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 MYRIPQ8NFW9 859 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 WNK4Q96J92 1243 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 PIGSQ96S52 555 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 LLPHQ9BRT6 129 aaKnown RBP13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 SCAND2PQ9GZW5 306 aaPredicted RBP13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 ARHGEF10LQ9HCE6 1279 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 PICK1Q9NRD5 415 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 TMEM232C9JQI7 657 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 CALM1P0DP23 149 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 CALM2P0DP24 149 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 CALM3P0DP25 149 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 SSRP1Q08945 709 aaKnown RBP13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 ADGRF4Q8IZF3 695 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 ALG1Q9BT22 464 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 VCPKMTQ9H867 229 aa13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 DDX19AQ9NUU7 478 aaKnown RBP13.19□□□□□ -0.3
CHRNB3-201ENST00000289957 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 ZNF280CQ8ND82 737 aa13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 GMCL1P1Q8NEA9 526 aa13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 JMJD4Q9H9V9 463 aa13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 AFG3L2Q9Y4W6 797 aa13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 KIF28PB7ZC32 967 aa13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 DHX16O60231 1041 aaKnown RBP13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 VCAM1P19320 739 aa13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 RCAN1P53805 252 aa13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
CHRNB3-201ENST00000289957 PTPRFP10586 1907 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 GOLGA6L6A8MZA4 724 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 BMP3P12645 472 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 KIF5BP33176 963 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 NF2P35240 595 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 IREB2P48200 963 aaKnown RBP13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 BACE1P56817 501 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 MAP3K11Q16584 847 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 NOL9Q5SY16 702 aaKnown RBP13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 TREML2Q5T2D2 321 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 NUP62CLQ9H1M0 184 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 CSADQ9Y600 493 aa13.17□□□□□ -0.3
CHRNB3-201ENST00000289957 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 NT5C2P49902 561 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 IKQ13123 557 aaPredicted RBP13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 LDLRAD1Q5T700 205 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms