RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CLTAP09496 248 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 OGFOD1Q8N543 542 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 SAMSN1Q9NSI8 373 aaKnown RBP16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 DBNLQ9UJU6 430 aaKnown RBP16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 FAM184BQ9ULE4 1060 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 SSX2IPQ9Y2D8 614 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 ERVK-7P63135 1459 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 TPH2Q8IWU9 490 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 RAB17Q9H0T7 212 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 TNKSO95271 1327 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 PPFIA4O75335 1185 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 CCDC13Q8IYE1 715 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 RPGRIP1Q96KN7 1286 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 BTG4Q9NY30 223 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 CCDC84Q86UT8 332 aaPredicted RBP16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 VPS52Q8N1B4 723 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 PANK4Q9NVE7 773 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 MROH5Q6ZUA9 1318 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 PHLPP2Q6ZVD8 1323 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 CTSWP56202 376 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 MRPS25P82663 173 aaKnown RBP16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 EHHADHQ08426 723 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 MED23Q9ULK4 1368 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 DNM2P50570 870 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 ITIH3Q06033 890 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 CCDC38Q502W7 563 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 ANKRD65E5RJM6 399 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 IFT88Q13099 833 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 LRCH2Q5VUJ6 765 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 REXO1Q8N1G1 1221 aaKnown RBP16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 MSANTD4Q8NCY6 345 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 C8orf37Q96NL8 207 aa16.91■□□□□ 0.3
SHROOM4-201ENST00000289292 PDE6AP16499 860 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 E2F4Q16254 413 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 CNOT6LQ96LI5 555 aaKnown RBP16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 PTPN22Q9Y2R2 807 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 SORBS3O60504 671 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 GYG1P46976 350 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 SMTNP53814 917 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 ADCY1Q08828 1119 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 NCBP1Q09161 790 aaKnown RBP16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 NAA30Q147X3 362 aaPredicted RBP16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 GEN1Q17RS7 908 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 MUM1Q2TAK8 710 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 SMC1BQ8NDV3 1235 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 RASGRP4Q8TDF6 673 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 MED4Q9NPJ6 270 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 GTPBP6O43824 516 aaPredicted RBP16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 SNCBQ16143 134 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 MYOCDQ8IZQ8 938 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 VCXQ9H320 206 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 TPX2Q9ULW0 747 aaKnown RBP16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 MOCS3O95396 460 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 SLC7A5Q01650 507 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 FBXO18Q8NFZ0 1043 aa16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 MPHOSPH6Q99547 160 aaKnown RBP16.9■□□□□ 0.3
SHROOM4-201ENST00000289292 E2F5Q15329 346 aa16.89■□□□□ 0.29
SHROOM4-201ENST00000289292 PDE1CQ14123 709 aaPredicted RBP16.89■□□□□ 0.29
SHROOM4-201ENST00000289292 HAUS4Q9H6D7 363 aa16.89■□□□□ 0.29
SHROOM4-201ENST00000289292 BCRP11274 1271 aa16.89■□□□□ 0.29
SHROOM4-201ENST00000289292 ATP1A3P13637 1013 aa16.89■□□□□ 0.29
SHROOM4-201ENST00000289292 OSBPL3Q9H4L5 887 aa16.89■□□□□ 0.29
SHROOM4-201ENST00000289292 HNRNPH2P55795 449 aaKnown RBP16.89■□□□□ 0.29
SHROOM4-201ENST00000289292 CEP120Q8N960 986 aa16.89■□□□□ 0.29
SHROOM4-201ENST00000289292 CFBP00751 764 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 SDCCAG8Q86SQ7 713 aaPredicted RBP16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 RPUSD2Q8IZ73 545 aaKnown RBP16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 RILPQ96NA2 401 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 H7C1D1 291 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 RESTQ13127 1097 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 SLC39A14Q15043 492 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 DCUN1D2Q6PH85 259 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 AIFM3Q96NN9 605 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 IFNAR2P48551 515 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 TRIML1Q8N9V2 468 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 A0A1W2PQ27 194 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 A0A1W2PQ64 194 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 A0A1W2PQD8 194 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 XRCC5P13010 732 aaKnown RBP16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 SLC1A4P43007 532 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 PPP2R5CQ13362 524 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 SLFNL1Q499Z3 407 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 CASC4Q6P4E1 433 aa16.88■□□□□ 0.29
SHROOM4-201ENST00000289292 CA8P35219 290 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 TRPC3Q13507 836 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 VCX3BQ9H321 246 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 UGGT1Q9NYU2 1555 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 STRN3Q13033 797 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 LRRC47Q8N1G4 583 aaKnown RBP16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 EPB41L5Q9HCM4 733 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 EIF4G3O43432 1585 aaKnown RBP16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 USP27XA6NNY8 438 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 ADCY8P40145 1251 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 TOGARAM2Q6ZUX3 1019 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 I3L4J1 428 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 PPP6R2O75170 966 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 SCG2P13521 617 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 CCDC14Q49A88 953 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 SPTLC3Q9NUV7 552 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms