RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 RAD9BQ6WBX8 426 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 ACTN4O43707 911 aaKnown RBP17.83■□□□□ 0.44
SMAD6-201ENST00000288840 SRGAP2O75044 1071 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 CYLC1P35663 651 aaPredicted RBP17.83■□□□□ 0.44
SMAD6-201ENST00000288840 ZNF76P36508 570 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 AMPD3Q01432 767 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 KIF5AQ12840 1032 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 PPP2R5BQ15173 497 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 COA7Q96BR5 231 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 BSDC1Q9NW68 430 aaPredicted RBP17.83■□□□□ 0.44
SMAD6-201ENST00000288840 ARPP21Q9UBL0 812 aaPredicted RBP17.83■□□□□ 0.44
SMAD6-201ENST00000288840 JCADQ9P266 1359 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 STK36Q9NRP7 1315 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 GTPBP6O43824 516 aaPredicted RBP17.82■□□□□ 0.44
SMAD6-201ENST00000288840 SCNN1DP51172 638 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 GTF2IP78347 998 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 CACNB1Q02641 598 aaPredicted RBP17.82■□□□□ 0.44
SMAD6-201ENST00000288840 GABPB1Q06547 395 aaPredicted RBP17.82■□□□□ 0.44
SMAD6-201ENST00000288840 TRAPPC3LQ5T215 181 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 PLCD3Q8N3E9 789 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 TRIM10Q9UDY6 481 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 SYCP1Q15431 976 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 CHP1Q99653 195 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 EPN1Q9Y6I3 576 aaPredicted RBP17.82■□□□□ 0.44
SMAD6-201ENST00000288840 PHLPP2Q6ZVD8 1323 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 NTSR2O95665 410 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 REXO1L1PQ8IX06 675 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 POLD4Q9HCU8 107 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 LRWD1Q9UFC0 647 aa17.82■□□□□ 0.44
SMAD6-201ENST00000288840 KRT86O43790 486 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 USO1O60763 962 aaKnown RBP17.81■□□□□ 0.44
SMAD6-201ENST00000288840 KIF20AO95235 890 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 NONOQ15233 471 aaKnown RBP eCLIP17.81■□□□□ 0.446e-7■■■■□ 23.2
SMAD6-201ENST00000288840 CLEC10AQ8IUN9 316 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 OR8K1Q8NGG5 319 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 BTDP43251 543 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 TERF2Q15554 542 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 GPR161Q8N6U8 529 aaKnown RBP17.81■□□□□ 0.44
SMAD6-201ENST00000288840 PYM1Q9BRP8 204 aaKnown RBP17.81■□□□□ 0.44
SMAD6-201ENST00000288840 PDE11AQ9HCR9 933 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 TTF2Q9UNY4 1162 aaKnown RBP17.81■□□□□ 0.44
SMAD6-201ENST00000288840 CAMTA1Q9Y6Y1 1673 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 TRAF5O00463 557 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 DDAH1O94760 285 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 GNA11P29992 359 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 GSTO1P78417 241 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 C2CD5Q86YS7 1000 aa17.81■□□□□ 0.44
SMAD6-201ENST00000288840 SLC16A2P36021 539 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 ZNF622Q969S3 477 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMAD6-201ENST00000288840 JAKMIP2Q96AA8 810 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 NSUN4Q96CB9 384 aaKnown RBP17.8■□□□□ 0.44
SMAD6-201ENST00000288840 ATP8A2Q9NTI2 1148 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 HDAC6Q9UBN7 1215 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 MFAP3LO75121 409 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 NOP2P46087 812 aaKnown RBP17.8■□□□□ 0.44
SMAD6-201ENST00000288840 TROAPQ12815 778 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 LONRF2Q1L5Z9 754 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 KRT79Q5XKE5 535 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 SNX29Q8TEQ0 813 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 RAB34Q9BZG1 259 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 INTS13Q9NVM9 706 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 ADGRG1Q9Y653 693 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 RIC1Q4ADV7 1423 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 WDR66Q8TBY9 1149 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 PIGSQ96S52 555 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 PNPLA7Q6ZV29 1317 aa17.8■□□□□ 0.44
SMAD6-201ENST00000288840 CXCR5P32302 372 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 SV2BQ7L1I2 683 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 PHF20Q9BVI0 1012 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 SUGCTQ9HAC7 445 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 CALCOCO1Q9P1Z2 691 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 PARP3Q9Y6F1 533 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 PLCG1P19174 1290 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 TSG101Q99816 390 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 TUBGCP2Q9BSJ2 902 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 REXO1Q8N1G1 1221 aaKnown RBP17.79■□□□□ 0.44
SMAD6-201ENST00000288840 ZNF512BQ96KM6 892 aaPredicted RBP17.79■□□□□ 0.44
SMAD6-201ENST00000288840 GBP3Q9H0R5 595 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 KANSL2Q9H9L4 492 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 CDC23Q9UJX2 597 aa17.79■□□□□ 0.44
SMAD6-201ENST00000288840 COL5A2P05997 1499 aaPredicted RBP17.79■□□□□ 0.44
SMAD6-201ENST00000288840 RRAGAQ7L523 313 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 TICAM2Q86XR7 235 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 RSPH14Q9UHP6 348 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 PCDHA4Q9UN74 947 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 TADA3O75528 432 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 PKN1Q16512 942 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 DOK7Q18PE1 504 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 TBCKQ8TEA7 893 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 TMEM60Q9H2L4 133 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 TCP11X2Q5H9J9 407 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 FAM196AQ6ZSG2 479 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 ZNF579Q8NAF0 562 aaKnown RBP17.78■□□□□ 0.44
SMAD6-201ENST00000288840 GJA10Q969M2 543 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 BRIP1Q9BX63 1249 aa17.78■□□□□ 0.44
SMAD6-201ENST00000288840 CWC15Q9P013 229 aaKnown RBP17.78■□□□□ 0.44
SMAD6-201ENST00000288840 MORC2Q9Y6X9 1032 aaPredicted RBP17.78■□□□□ 0.44
SMAD6-201ENST00000288840 UBAP1LF5GYI3 381 aa17.77■□□□□ 0.44
SMAD6-201ENST00000288840 KRT83P78385 493 aa17.77■□□□□ 0.44
SMAD6-201ENST00000288840 NR1I3Q14994 352 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms