RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 PKN2Q16513 984 aaKnown RBP23.28■■□□□ 1.32
TIMP4-201ENST00000287814 C8orf34Q49A92 452 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 BTNL9Q6UXG8 535 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 FAM160B2Q86V87 743 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 TNS4Q8IZW8 715 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 SLC38A10Q9HBR0 1119 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 PRR12Q9ULL5 1215 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 SH2B2O14492 632 aaPredicted RBP23.27■■□□□ 1.32
TIMP4-201ENST00000287814 GNRH1P01148 92 aa23.27■■□□□ 1.32
TIMP4-201ENST00000287814 SNAP25P60880 206 aa23.27■■□□□ 1.32
TIMP4-201ENST00000287814 MTA3Q9BTC8 594 aa23.27■■□□□ 1.32
TIMP4-201ENST00000287814 CPVLQ9H3G5 476 aa23.27■■□□□ 1.32
TIMP4-201ENST00000287814 GJD2Q9UKL4 321 aa23.27■■□□□ 1.32
TIMP4-201ENST00000287814 CENPFP49454 3210 aa23.27■■□□□ 1.32
TIMP4-201ENST00000287814 MAPK4P31152 587 aa23.26■■□□□ 1.31
TIMP4-201ENST00000287814 CCNA1P78396 465 aa23.26■■□□□ 1.31
TIMP4-201ENST00000287814 FBXO46Q6PJ61 603 aaPredicted RBP23.26■■□□□ 1.31
TIMP4-201ENST00000287814 DHX32Q7L7V1 743 aaKnown RBP23.26■■□□□ 1.31
TIMP4-201ENST00000287814 GPR142Q7Z601 462 aa23.26■■□□□ 1.31
TIMP4-201ENST00000287814 TMEM87BQ96K49 555 aa23.26■■□□□ 1.31
TIMP4-201ENST00000287814 JAKMIP1Q96N16 626 aaKnown RBP23.26■■□□□ 1.31
TIMP4-201ENST00000287814 PTCH2Q9Y6C5 1203 aa23.26■■□□□ 1.31
TIMP4-201ENST00000287814 MGAMO43451 1857 aa23.26■■□□□ 1.31
TIMP4-201ENST00000287814 ERCC3P19447 782 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 STAT3P40763 770 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 CPXCR1Q8N123 301 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 UBA5Q9GZZ9 404 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 RAVER2Q9HCJ3 691 aaKnown RBP23.25■■□□□ 1.31
TIMP4-201ENST00000287814 DOCK3Q8IZD9 2030 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 COL11A1P12107 1806 aaPredicted RBP23.25■■□□□ 1.31
TIMP4-201ENST00000287814 ZBED4O75132 1171 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 HOXD10P28358 340 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 FLT3LGP49771 235 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 TROAPQ12815 778 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 STAG2Q8N3U4 1231 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 COA7Q96BR5 231 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 RIPK3Q9Y572 518 aa23.25■■□□□ 1.31
TIMP4-201ENST00000287814 ZNF536O15090 1300 aa23.24■■□□□ 1.31
TIMP4-201ENST00000287814 SYDE2Q5VT97 1194 aa23.24■■□□□ 1.31
TIMP4-201ENST00000287814 WDR78Q5VTH9 848 aa23.24■■□□□ 1.31
TIMP4-201ENST00000287814 PLEKHH3Q7Z736 793 aa23.24■■□□□ 1.31
TIMP4-201ENST00000287814 RIOX2Q8IUF8 465 aa23.24■■□□□ 1.31
TIMP4-201ENST00000287814 CCAR1Q8IX12 1150 aaKnown RBP23.24■■□□□ 1.31
TIMP4-201ENST00000287814 ATP2A1O14983 1001 aa23.23■■□□□ 1.31
TIMP4-201ENST00000287814 LIFRP42702 1097 aa23.23■■□□□ 1.31
TIMP4-201ENST00000287814 GPATCH4Q5T3I0 446 aaKnown RBP23.23■■□□□ 1.31
TIMP4-201ENST00000287814 NCAPG2Q86XI2 1143 aa23.23■■□□□ 1.31
TIMP4-201ENST00000287814 SHCBP1Q8NEM2 672 aa23.23■■□□□ 1.31
TIMP4-201ENST00000287814 MYL10Q9BUA6 226 aa23.23■■□□□ 1.31
TIMP4-201ENST00000287814 WDR19Q8NEZ3 1342 aa23.23■■□□□ 1.31
TIMP4-201ENST00000287814 PARP1P09874 1014 aaKnown RBP23.22■■□□□ 1.31
TIMP4-201ENST00000287814 PRMT2P55345 433 aa23.22■■□□□ 1.31
TIMP4-201ENST00000287814 SNRNP48Q6IEG0 339 aaKnown RBP23.22■■□□□ 1.31
TIMP4-201ENST00000287814 TEX13BQ9BXU2 312 aa23.22■■□□□ 1.31
TIMP4-201ENST00000287814 MAD2L2Q9UI95 211 aa23.22■■□□□ 1.31
TIMP4-201ENST00000287814 HPS5Q9UPZ3 1129 aa23.22■■□□□ 1.31
TIMP4-201ENST00000287814 PALM3A6NDB9 673 aaPredicted RBP23.22■■□□□ 1.31
TIMP4-201ENST00000287814 HMGB1P09429 215 aaKnown RBP23.22■■□□□ 1.31
TIMP4-201ENST00000287814 SLC4A3P48751 1232 aa23.22■■□□□ 1.31
TIMP4-201ENST00000287814 ASPRV1Q53RT3 343 aa23.22■■□□□ 1.31
TIMP4-201ENST00000287814 MORN1Q5T089 497 aa23.22■■□□□ 1.31
TIMP4-201ENST00000287814 ZNF654Q8IZM8 581 aa23.22■■□□□ 1.31
TIMP4-201ENST00000287814 AGBL1Q96MI9 1066 aa23.22■■□□□ 1.31
TIMP4-201ENST00000287814 RANBP17Q9H2T7 1088 aaKnown RBP23.22■■□□□ 1.31
TIMP4-201ENST00000287814 SLC25A27O95847 323 aa23.21■■□□□ 1.31
TIMP4-201ENST00000287814 FDX1P10109 184 aa23.21■■□□□ 1.31
TIMP4-201ENST00000287814 PTPREP23469 700 aa23.21■■□□□ 1.31
TIMP4-201ENST00000287814 GRM4Q14833 912 aa23.21■■□□□ 1.31
TIMP4-201ENST00000287814 CCDC174Q6PII3 467 aa23.21■■□□□ 1.31
TIMP4-201ENST00000287814 BLOC1S2Q6QNY1 142 aa23.21■■□□□ 1.31
TIMP4-201ENST00000287814 CATIPQ7Z7H3 387 aa23.21■■□□□ 1.31
TIMP4-201ENST00000287814 TMTC2Q8N394 836 aa23.21■■□□□ 1.31
TIMP4-201ENST00000287814 USP6NLQ92738 828 aa23.21■■□□□ 1.31
TIMP4-201ENST00000287814 CTDP1Q9Y5B0 961 aaPredicted RBP23.21■■□□□ 1.31
TIMP4-201ENST00000287814 TAL1P17542 331 aaPredicted RBP23.2■■□□□ 1.3
TIMP4-201ENST00000287814 CASTP20810 708 aaKnown RBP23.2■■□□□ 1.3
TIMP4-201ENST00000287814 SLC35G1Q2M3R5 365 aa23.2■■□□□ 1.3
TIMP4-201ENST00000287814 NFXL1Q6ZNB6 911 aa23.2■■□□□ 1.3
TIMP4-201ENST00000287814 RAET1EQ8TD07 263 aa23.2■■□□□ 1.3
TIMP4-201ENST00000287814 ABHD8Q96I13 439 aa23.2■■□□□ 1.3
TIMP4-201ENST00000287814 MROH8Q9H579 483 aa23.2■■□□□ 1.3
TIMP4-201ENST00000287814 PLXNB2O15031 1838 aa23.2■■□□□ 1.3
TIMP4-201ENST00000287814 RPS6KB1P23443 525 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 OAZ1P54368 228 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 SGMS1Q86VZ5 419 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 RAB11FIP4Q86YS3 637 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 NUP133Q8WUM0 1156 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 NUDT12Q9BQG2 462 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 CWC22Q9HCG8 908 aaKnown RBP23.19■■□□□ 1.3
TIMP4-201ENST00000287814 ZSWIM6Q9HCJ5 1215 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 CCDC69A6NI79 296 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 KLRF2D3W0D1 207 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 RXRAP19793 462 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 CYP2B6P20813 491 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 PSMA5P28066 241 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 IRF5Q13568 498 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 GRB14Q14449 540 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 NBPF11Q86T75 865 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 ADGRF4Q8IZF3 695 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 SH3TC2Q8TF17 1288 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms