RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SIGLEC1Q9BZZ2 1709 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 ZBTB22O15209 634 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 LIFRP42702 1097 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 USP49Q70CQ1 688 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 CCDC25Q86WR0 208 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 UBLCP1Q8WVY7 318 aaPredicted RBP13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 LRWD1Q9UFC0 647 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 FRMPD2Q68DX3 1309 aaPredicted RBP13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 CLCN6P51797 869 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 PLS1Q14651 629 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 TYW1BQ6NUM6 668 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 SLC35F6Q8N357 371 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 JRKLQ9Y4A0 524 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 RIPOR2Q9Y4F9 1068 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 SMCO2A6NFE2 343 aa13.96□□□□□ -0.18
SLC6A1-201ENST00000287766 STX10O60499 249 aa13.96□□□□□ -0.18
SLC6A1-201ENST00000287766 NONOQ15233 471 aaKnown RBP eCLIP13.96□□□□□ -0.18
SLC6A1-201ENST00000287766 DIXDC1Q155Q3 683 aa13.96□□□□□ -0.18
SLC6A1-201ENST00000287766 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.18
SLC6A1-201ENST00000287766 ITSN1Q15811 1721 aa13.96□□□□□ -0.18
SLC6A1-201ENST00000287766 UTYO14607 1347 aa13.96□□□□□ -0.18
SLC6A1-201ENST00000287766 ZMYND10O75800 440 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 KRT13P13646 458 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 ST5P78524 1137 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 LRCH2Q5VUJ6 765 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 STIM2Q9P246 746 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 DIP2BQ9P265 1576 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 CTNNA2P26232 953 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 ARHGAP25P42331 645 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 RAPGEF1Q13905 1077 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 KMT5BQ4FZB7 885 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 CEP85LQ5SZL2 805 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 RESP18Q5W5W9 173 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 TOGARAM2Q6ZUX3 1019 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 SNX29Q8TEQ0 813 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 SELENOOQ9BVL4 669 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 RNF26Q9BY78 433 aaPredicted RBP13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 SLC39A2Q9NP94 309 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 GSG1L2A8MUP6 293 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 KLRF2D3W0D1 207 aa13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 RPN1P04843 607 aaKnown RBP13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 DCAF17Q5H9S7 520 aaPredicted RBP13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 FEZ2Q9UHY8 353 aaPredicted RBP13.95□□□□□ -0.18
SLC6A1-201ENST00000287766 TCP10Q12799 353 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 PPP2R5BQ15173 497 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 GPR161Q8N6U8 529 aaKnown RBP13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 IRX2Q9BZI1 471 aaPredicted RBP13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 SAMM50Q9Y512 469 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 TEX33O43247 280 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 SLFN14P0C7P3 912 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 CCDC172P0C7W6 258 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 C2CD5Q86YS7 1000 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 OR8K1Q8NGG5 319 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 KCNB2Q92953 911 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 CUL5Q93034 780 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 TMOD2Q9NZR1 351 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 EFCAB8A8MWE9 144 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 TBCAO75347 108 aaKnown RBP13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 SYCP3Q8IZU3 236 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 LRRC47Q8N1G4 583 aaKnown RBP13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 GOLGA5Q8TBA6 731 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 EYA3Q99504 573 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 SRP68Q9UHB9 627 aaKnown RBP13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 PTPREP23469 700 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 GYS2P54840 703 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 CCZ1BP86790 482 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 CCZ1P86791 482 aaPredicted RBP13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 GRIN1Q05586 938 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 E4F1Q66K89 784 aaPredicted RBP13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 METTL16Q86W50 562 aaKnown RBP13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 ZNF710Q8N1W2 664 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 PDE11AQ9HCR9 933 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 GDAQ9Y2T3 454 aa13.94□□□□□ -0.18
SLC6A1-201ENST00000287766 PALLDQ8WX93 1383 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 USP17L3A6NCW0 530 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 USP17L4A6NCW7 530 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 PRDX5P30044 214 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 COPB1P53618 953 aaKnown RBP13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 MTF1Q14872 753 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 USP17L1Q7RTZ2 530 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 PPFIBP2Q8ND30 876 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 PAGE5Q96GU1 130 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 PPANQ9NQ55 473 aaKnown RBP13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 SRPRBQ9Y5M8 271 aaKnown RBP13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 CCT5P48643 541 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 RRAGAQ7L523 313 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 DAAM2Q86T65 1068 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 FMNL3Q8IVF7 1028 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 TRIML1Q8N9V2 468 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 ST7Q9NRC1 585 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 PKD2L1Q9P0L9 805 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 MROH7-TTC4A0A0A0MT08 1334 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 B4DLN1 442 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 ATP1A2P50993 1020 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 PPP2R5AQ15172 486 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms