RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 USP28Q96RU2 1077 aa9.95□□□□□ -0.82
SMC2-201ENST00000286398 PARD6BQ9BYG5 372 aa9.95□□□□□ -0.82
SMC2-201ENST00000286398 MRPL44Q9H9J2 332 aaKnown RBP9.95□□□□□ -0.82
SMC2-201ENST00000286398 PRG4Q92954 1404 aaPredicted RBP9.95□□□□□ -0.82
SMC2-201ENST00000286398 ATF7P17544 494 aaPredicted RBP9.95□□□□□ -0.82
SMC2-201ENST00000286398 RBM6P78332 1123 aaKnown RBP9.95□□□□□ -0.82
SMC2-201ENST00000286398 ARHGEF18Q6ZSZ5 1173 aa9.95□□□□□ -0.82
SMC2-201ENST00000286398 CCHCR1Q8TD31 782 aa9.95□□□□□ -0.82
SMC2-201ENST00000286398 MYL10Q9BUA6 226 aa9.95□□□□□ -0.82
SMC2-201ENST00000286398 GPCPD1Q9NPB8 672 aa9.95□□□□□ -0.82
SMC2-201ENST00000286398 ZNF148Q9UQR1 794 aa9.95□□□□□ -0.82
SMC2-201ENST00000286398 ESYT2A0FGR8 921 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 H7C1D1 291 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 INHBAP08476 426 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 KRT24Q2M2I5 525 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 MAGOHBQ96A72 148 aaKnown RBP9.94□□□□□ -0.82
SMC2-201ENST00000286398 NBPF3Q9H094 633 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 PNMA6AP0CW24 399 aaPredicted RBP9.94□□□□□ -0.82
SMC2-201ENST00000286398 ADCY1Q08828 1119 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 GRAMD1BQ3KR37 738 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 CACTINQ8WUQ7 758 aaKnown RBP9.94□□□□□ -0.82
SMC2-201ENST00000286398 SH3GL3Q99963 347 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 PACSIN2Q9UNF0 486 aaPredicted RBP9.94□□□□□ -0.82
SMC2-201ENST00000286398 SCAF11Q99590 1463 aaKnown RBP9.94□□□□□ -0.82
SMC2-201ENST00000286398 TRIML1Q8N9V2 468 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 CNOT10Q9H9A5 744 aaKnown RBP9.94□□□□□ -0.82
SMC2-201ENST00000286398 ATP8A1Q9Y2Q0 1164 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 PHLPP2Q6ZVD8 1323 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 GOLGA8QA0A0J9YX86 632 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 GOLGA8OA6NCC3 632 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 GOLGA8NF8WBI6 632 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 NR1D1P20393 614 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 TIMM10P62072 90 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 SPATA1Q5VX52 437 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 FNBP4Q8N3X1 1017 aaPredicted RBP9.94□□□□□ -0.82
SMC2-201ENST00000286398 RDH13Q8NBN7 331 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMC2-201ENST00000286398 APPBP2Q92624 585 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 VTI1AQ96AJ9 217 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 TUBB6Q9BUF5 446 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 TM6SF1Q9BZW5 370 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 DAAM1Q9Y4D1 1078 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 NEK2P51955 445 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 YWHAGP61981 247 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMC2-201ENST00000286398 DYNC1I2Q13409 638 aaKnown RBP9.94□□□□□ -0.82
SMC2-201ENST00000286398 CASP8Q14790 479 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 ZNF804AQ7Z570 1209 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 HDAC11Q96DB2 347 aa9.94□□□□□ -0.82
SMC2-201ENST00000286398 ATAD2BQ9ULI0 1458 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 SNX1Q13596 522 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 TRIM42Q8IWZ5 723 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 CCDC124Q96CT7 223 aaKnown RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 SPZ1Q9BXG8 430 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 GLT8D2Q9H1C3 349 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 KRT82Q9NSB4 513 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 ARMCX3Q9UH62 379 aaPredicted RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 AOX1Q06278 1338 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 EIF3CLB5ME19 914 aaKnown RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 GNGT2O14610 69 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 LMNB2Q03252 620 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 BFSP1Q12934 665 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 PPP2R5BQ15173 497 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 CALCRLQ16602 461 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 ME3Q16798 604 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 FBXO38Q6PIJ6 1188 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 TTC6Q86TZ1 520 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 TDRD7Q8NHU6 1098 aaKnown RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 PSPC1Q8WXF1 523 aaKnown RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 EIF3CQ99613 913 aaKnown RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 CCDC68Q9H2F9 335 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 ORC6Q9Y5N6 252 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 MAD1L1Q9Y6D9 718 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 GPAA1O43292 621 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 SAT1P21673 171 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 POLR2FP61218 127 aaKnown RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 PDE1BQ01064 536 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 PSMD2Q13200 908 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 ZC3H18Q86VM9 953 aaKnown RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 TAB3Q8N5C8 712 aaPredicted RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 ARMC2Q8NEN0 867 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 INTUQ9ULD6 942 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 MTMR6Q9Y217 621 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 KIF1CO43896 1103 aaKnown RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 LDHBP07195 334 aaKnown RBP9.93□□□□□ -0.82
SMC2-201ENST00000286398 CMA1P23946 247 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 GNPTABQ3T906 1256 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 ZNF449Q6P9G9 518 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 MYOCDQ8IZQ8 938 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 DCLK2Q8N568 766 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 FLCNQ8NFG4 579 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 DYDC2Q96IM9 177 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 ST7Q9NRC1 585 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 STK24Q9Y6E0 443 aa9.93□□□□□ -0.82
SMC2-201ENST00000286398 PRDM1O75626 825 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 ESRRAP11474 423 aaPredicted RBP9.92□□□□□ -0.82
SMC2-201ENST00000286398 CASP14P31944 242 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 CDR2Q01850 454 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 KIF22Q14807 665 aa9.92□□□□□ -0.82
SMC2-201ENST00000286398 HADHQ16836 314 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms