RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 USP17L22D6RA61 530 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 USP17L17D6RBQ6 530 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 USP17L19D6RCP7 530 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 USP17L20D6RJB6 530 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 HMGCS2P54868 508 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 USP17L24Q0WX57 530 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 ASPRV1Q53RT3 343 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 USP17L6PQ6QN14 398 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 APOBEC3FQ8IUX4 373 aaKnown RBP11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 PGAP2Q9UHJ9 254 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 PCDHA1Q9Y5I3 950 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 KIF13BQ9NQT8 1826 aa11.26□□□□□ -0.61
PPP4R1-201ENST00000285124 CCDC194A0A1B0GVG4 234 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 QRICH1Q2TAL8 776 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 CKAP2LQ8IYA6 745 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 PDILTQ8N807 584 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 CLMNQ96JQ2 1002 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 NAV1Q8NEY1 1877 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 TCHHQ07283 1943 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 DDX60LQ5H9U9 1706 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 A0A087WWV3 80 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 SPTLC2O15270 562 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 PPP1R11O60927 126 aaPredicted RBP11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 TOB1P50616 345 aaPredicted RBP11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 GRIN1Q05586 938 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 CDC37Q16543 378 aaPredicted RBP11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 DCAF15Q66K64 600 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 CCAR1Q8IX12 1150 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 BLIDQ8IZY5 108 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 PHF20Q9BVI0 1012 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 DACT1Q9NYF0 836 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 PCDHA7Q9UN72 937 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 MAST2Q6P0Q8 1798 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 STK36Q9NRP7 1315 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 STXBP3O00186 592 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 SOCS7O14512 581 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 CDC25AP30304 524 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 HOXA13P31271 388 aaPredicted RBP11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 RCAN1P53805 252 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 UBE2HP62256 183 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 GSE1Q14687 1217 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 LETM2Q2VYF4 491 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 SUPT20HL1Q3ZLR7 823 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 CLEC17AQ6ZS10 378 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 FCHSD1Q86WN1 690 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 RNF214Q8ND24 703 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 ELP3Q9H9T3 547 aa11.25□□□□□ -0.61
PPP4R1-201ENST00000285124 DLEC1Q9Y238 1755 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 PPP1R12BO60237 982 aaPredicted RBP11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 NR1I2O75469 434 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 FLOT1O75955 427 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 UBXN2AP68543 259 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 GPATCH4Q5T3I0 446 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 BRAPQ7Z569 592 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 METTL16Q86W50 562 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 TBC1D5Q92609 795 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 TAF1DQ9H5J8 278 aaPredicted RBP11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 GOPCQ9HD26 462 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 NMRK2Q9NPI5 230 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 BARHL2Q9NY43 387 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 TMX2Q9Y320 296 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 CSPP1Q1MSJ5 1256 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 KLHL40Q2TBA0 621 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 SKOR2Q2VWA4 1001 aaPredicted RBP11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 FSIP1Q8NA03 581 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 LINC00301Q8NCQ3 95 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 GJA10Q969M2 543 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 OTUD5Q96G74 571 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 PRR12Q9ULL5 1215 aa11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 CTDP1Q9Y5B0 961 aaPredicted RBP11.24□□□□□ -0.61
PPP4R1-201ENST00000285124 TIAM2Q8IVF5 1701 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 CTNND1O60716 968 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 U2AF2P26368 475 aaKnown RBP eCLIP11.23□□□□□ -0.613e-8■■■■■ 27.3
PPP4R1-201ENST00000285124 STAT2P52630 851 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 GRM1Q13255 1194 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 PLS1Q14651 629 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 NPY5RQ15761 445 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 SYDE2Q5VT97 1194 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 MKL1Q969V6 931 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 LZTS2Q9BRK4 669 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 SPZ1Q9BXG8 430 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 VCPKMTQ9H867 229 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 POTECB2RU33 542 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 USP2O75604 605 aaPredicted RBP11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 CFBP00751 764 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 ISM2Q6H9L7 571 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 KLRG1Q96E93 195 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 PLIN2Q99541 437 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 RIOX1Q9H6W3 641 aa11.23□□□□□ -0.61
PPP4R1-201ENST00000285124 PNMA6FA0A0J9YX94 578 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 ZBTB5O15062 677 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 TBC1D12O60347 775 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 SNHG28P0DPA3 235 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 PDIA4P13667 645 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 PTPRAP18433 802 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 FOXP1Q9H334 677 aaPredicted RBP11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 PSTPIP2Q9H939 334 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 C6orf50Q9HD87 102 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms