RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 SLC26A6Q9BXS9 759 aa25.31■■□□□ 1.64
PDLIM3-203ENST00000284771 TANGO6Q9C0B7 1094 aa25.31■■□□□ 1.64
PDLIM3-203ENST00000284771 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.31■■□□□ 1.64
PDLIM3-203ENST00000284771 FMNL1O95466 1100 aaPredicted RBP25.3■■□□□ 1.64
PDLIM3-203ENST00000284771 PKN1Q16512 942 aa25.3■■□□□ 1.64
PDLIM3-203ENST00000284771 CPLX2Q6PUV4 134 aaKnown RBP25.3■■□□□ 1.64
PDLIM3-203ENST00000284771 FASTKD5Q7L8L6 764 aaKnown RBP25.3■■□□□ 1.64
PDLIM3-203ENST00000284771 PIBF1Q8WXW3 757 aa25.3■■□□□ 1.64
PDLIM3-203ENST00000284771 PTPN18Q99952 460 aa25.3■■□□□ 1.64
PDLIM3-203ENST00000284771 FEM1BQ9UK73 627 aa25.3■■□□□ 1.64
PDLIM3-203ENST00000284771 PRR12Q9ULL5 1215 aa25.3■■□□□ 1.64
PDLIM3-203ENST00000284771 CCL15-CCL14A0A0B4J2E2 113 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 RASSF10A6NK89 507 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 HSP90AA1P07900 732 aaKnown RBP25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 HOXA7P31268 230 aaPredicted RBP25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 HTRA3P83110 453 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 CCL15Q16663 113 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 CYP4F22Q6NT55 531 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 MTMR8Q96EF0 704 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 ZIC5Q96T25 663 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 RNF26Q9BY78 433 aaPredicted RBP25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 AGTPBP1Q9UPW5 1226 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 PRPF3O43395 683 aaKnown RBP25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 FLOT1O75955 427 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 CDKL5O76039 1030 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 CETPP11597 493 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 GJB2P29033 226 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 SNAP25P60880 206 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 SSRP1Q08945 709 aaKnown RBP25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 IKQ13123 557 aaPredicted RBP25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 SYDE2Q5VT97 1194 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 CHURC1Q8WUH1 139 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 CCDC102AQ96A19 550 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 KIFC2Q96AC6 838 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 AIFM3Q96NN9 605 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 PIGSQ96S52 555 aa25.29■■□□□ 1.64
PDLIM3-203ENST00000284771 USP17L15C9J2P7 530 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 USP17L13C9JLJ4 530 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 USP17L11C9JVI0 530 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 USP17L18D6R9N7 530 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 USP17L22D6RA61 530 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 USP17L17D6RBQ6 530 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 USP17L19D6RCP7 530 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 USP17L20D6RJB6 530 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 USP17L24Q0WX57 530 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 POTEEQ6S8J3 1075 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 SLF1Q9BQI6 1058 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 ORC3Q9UBD5 711 aaPredicted RBP25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 SMC3Q9UQE7 1217 aa25.28■■□□□ 1.64
PDLIM3-203ENST00000284771 MYH6P13533 1939 aa25.27■■□□□ 1.64
PDLIM3-203ENST00000284771 TESPA1A2RU30 521 aaPredicted RBP25.27■■□□□ 1.64
PDLIM3-203ENST00000284771 DEFB115Q30KQ5 88 aa25.27■■□□□ 1.64
PDLIM3-203ENST00000284771 FAM160B2Q86V87 743 aa25.27■■□□□ 1.64
PDLIM3-203ENST00000284771 PRPF38AQ8NAV1 312 aaKnown RBP25.27■■□□□ 1.64
PDLIM3-203ENST00000284771 PPP1R9AQ9ULJ8 1098 aa25.27■■□□□ 1.64
PDLIM3-203ENST00000284771 BTBD19C9JJ37 291 aa25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 COG2Q14746 738 aa25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 SAMD1Q6SPF0 538 aaPredicted RBP25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 HOMER1Q86YM7 354 aa25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 STK36Q9NRP7 1315 aa25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 PCNTO95613 3336 aa25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 SMCHD1A6NHR9 2005 aa25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 HMGN5P82970 282 aaKnown RBP25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 FAM43AQ8N2R8 423 aa25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 SHISA4Q96DD7 197 aa25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 ADAMTS5Q9UNA0 930 aa25.26■■□□□ 1.63
PDLIM3-203ENST00000284771 PPP1R11O60927 126 aaPredicted RBP25.25■■□□□ 1.63
PDLIM3-203ENST00000284771 DSG3P32926 999 aa25.25■■□□□ 1.63
PDLIM3-203ENST00000284771 GRM1Q13255 1194 aa25.25■■□□□ 1.63
PDLIM3-203ENST00000284771 PAXIP1Q6ZW49 1069 aaPredicted RBP25.25■■□□□ 1.63
PDLIM3-203ENST00000284771 TRIM22Q8IYM9 498 aa25.25■■□□□ 1.63
PDLIM3-203ENST00000284771 ATG4CQ96DT6 458 aa25.25■■□□□ 1.63
PDLIM3-203ENST00000284771 P2RX7Q99572 595 aaKnown RBP25.25■■□□□ 1.63
PDLIM3-203ENST00000284771 ASCC2Q9H1I8 757 aaPredicted RBP25.25■■□□□ 1.63
PDLIM3-203ENST00000284771 GJB4Q9NTQ9 266 aa25.25■■□□□ 1.63
PDLIM3-203ENST00000284771 DEXIO95424 95 aa25.24■■□□□ 1.63
PDLIM3-203ENST00000284771 QRICH1Q2TAL8 776 aa25.24■■□□□ 1.63
PDLIM3-203ENST00000284771 RRP36Q96EU6 259 aaKnown RBP25.24■■□□□ 1.63
PDLIM3-203ENST00000284771 RANBP17Q9H2T7 1088 aaKnown RBP25.24■■□□□ 1.63
PDLIM3-203ENST00000284771 DAXXQ9UER7 740 aaPredicted RBP25.24■■□□□ 1.63
PDLIM3-203ENST00000284771 SPDYE16A6NNV3 312 aaPredicted RBP25.23■■□□□ 1.63
PDLIM3-203ENST00000284771 ZBTB5O15062 677 aa25.23■■□□□ 1.63
PDLIM3-203ENST00000284771 CDC37Q16543 378 aaPredicted RBP25.23■■□□□ 1.63
PDLIM3-203ENST00000284771 PFKFB3Q16875 520 aaPredicted RBP25.23■■□□□ 1.63
PDLIM3-203ENST00000284771 PNMA6FA0A0J9YX94 578 aa25.23■■□□□ 1.63
PDLIM3-203ENST00000284771 MANSC4A6NHS7 340 aaPredicted RBP25.23■■□□□ 1.63
PDLIM3-203ENST00000284771 IGF2BP3O00425 579 aaKnown RBP eCLIP25.23■■□□□ 1.63
PDLIM3-203ENST00000284771 VWA5AO00534 786 aa25.23■■□□□ 1.63
PDLIM3-203ENST00000284771 ANKRD23Q86SG2 305 aa25.23■■□□□ 1.63
PDLIM3-203ENST00000284771 HOXC10Q9NYD6 342 aa25.23■■□□□ 1.63
PDLIM3-203ENST00000284771 ZNF536O15090 1300 aa25.22■■□□□ 1.63
PDLIM3-203ENST00000284771 PDHXO00330 501 aa25.22■■□□□ 1.63
PDLIM3-203ENST00000284771 SCG2P13521 617 aa25.22■■□□□ 1.63
PDLIM3-203ENST00000284771 DDIT3P35638 169 aa25.22■■□□□ 1.63
PDLIM3-203ENST00000284771 AKAP17AQ02040 695 aaKnown RBP25.22■■□□□ 1.63
PDLIM3-203ENST00000284771 TYW1BQ6NUM6 668 aa25.22■■□□□ 1.63
PDLIM3-203ENST00000284771 GPKOWQ92917 476 aaPredicted RBP eCLIP25.22■■□□□ 1.63
PDLIM3-203ENST00000284771 CAPNS2Q96L46 248 aa25.22■■□□□ 1.63
PDLIM3-203ENST00000284771 SLC38A10Q9HBR0 1119 aa25.22■■□□□ 1.63
PDLIM3-203ENST00000284771 COL11A1P12107 1806 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms