RNA–Protein interactions for RNA: ENST00000283228.6

PTPRR-201, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRR, Length 3,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-201ENST00000283228 IFT20Q8IY31 132 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 FUKQ8N0W3 1084 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 NSMCE1Q8WV22 266 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 MS4A14Q96JA4 679 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 FBXO2Q9UK22 296 aaPredicted RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 GDAQ9Y2T3 454 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 TRIM14Q14142 442 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 RILPL1Q5EBL4 403 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 MB21D2Q8IYB1 491 aaPredicted RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 OXER1Q8TDS5 423 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 UBLCP1Q8WVY7 318 aaPredicted RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 STAMBPL1Q96FJ0 436 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 COPRSQ9NQ92 184 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 CEP126Q9P2H0 1117 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 CEP170BQ9Y4F5 1589 aaPredicted RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 EME2A4GXA9 379 aaPredicted RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 RCCD1A6NED2 376 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 B4DLN1 442 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 ACTN4O43707 911 aaKnown RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 FAM153BP0C7A2 387 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 TBC1D8BQ0IIM8 1120 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 FAM153CQ494X1 144 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 EMBQ6PCB8 327 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 PROCA1Q8NCQ7 364 aaPredicted RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 IFIH1Q9BYX4 1025 aaKnown RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 NHEJ1Q9H9Q4 299 aaPredicted RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
PTPRR-201ENST00000283228 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 FAM153AQ9UHL3 310 aa12.68□□□□□ -0.38
PTPRR-201ENST00000283228 DPYDQ12882 1025 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 TDRD12Q587J7 1177 aaKnown RBP12.67□□□□□ -0.38
PTPRR-201ENST00000283228 TCP11X2Q5H9J9 407 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 CYB5R4Q7L1T6 521 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 TAX1BP1Q86VP1 789 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 DDX21Q9NR30 783 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPRR-201ENST00000283228 L3MBTL1Q9Y468 752 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 TMCO5BA8MYB1 307 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 UPP2O95045 317 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 PAK2Q13177 524 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 LRRC24Q50LG9 513 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 CCDC178Q5BJE1 867 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 FAM133BQ5BKY9 247 aaKnown RBP12.67□□□□□ -0.38
PTPRR-201ENST00000283228 ARFGAP2Q8N6H7 521 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 PARD3BQ8TEW8 1205 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 WASF1Q92558 559 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 HVCN1Q96D96 273 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 KRT12Q99456 494 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 CCDC113Q9H0I3 377 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.67□□□□□ -0.38
PTPRR-201ENST00000283228 BABAM1Q9NWV8 329 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 PLAAQ9Y263 795 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 SETD1BQ9UPS6 1966 aaKnown RBP12.67□□□□□ -0.38
PTPRR-201ENST00000283228 PHF20L1A8MW92 1017 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 GCOM1H8Y6P7 765 aaPredicted RBP12.67□□□□□ -0.38
PTPRR-201ENST00000283228 HOXB7P09629 217 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 PARP1P09874 1014 aaKnown RBP12.67□□□□□ -0.38
PTPRR-201ENST00000283228 MYZAPP0CAP1 466 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 KLK7P49862 253 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 IFFO1Q0D2I5 559 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 KCNB1Q14721 858 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 PAPD7Q5XG87 772 aaKnown RBP12.67□□□□□ -0.38
PTPRR-201ENST00000283228 TBC1D22AQ8WUA7 517 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 SAAL1Q96ER3 474 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 ACTR5Q9H9F9 607 aaPredicted RBP12.67□□□□□ -0.38
PTPRR-201ENST00000283228 NRXN3Q9Y4C0 1643 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 UBN2Q6ZU65 1347 aa12.67□□□□□ -0.38
PTPRR-201ENST00000283228 ERICH2A1L162 156 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 TRIM68Q6AZZ1 485 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 THEMISQ8N1K5 641 aaPredicted RBP12.66□□□□□ -0.38
PTPRR-201ENST00000283228 RBM12Q9NTZ6 932 aaKnown RBP12.66□□□□□ -0.38
PTPRR-201ENST00000283228 RANBP6O60518 1105 aaKnown RBP12.66□□□□□ -0.38
PTPRR-201ENST00000283228 FAM107AO95990 144 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 TOB1P50616 345 aaPredicted RBP12.66□□□□□ -0.38
PTPRR-201ENST00000283228 ESCO1Q5FWF5 840 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 APTXQ7Z2E3 356 aaKnown RBP12.66□□□□□ -0.38
PTPRR-201ENST00000283228 C2CD5Q86YS7 1000 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 CEP120Q8N960 986 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 SELENOSQ9BQE4 189 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 STK38LQ9Y2H1 464 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 USP6P35125 1406 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 GMNCA6NCL1 334 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 SARSP49591 514 aaKnown RBP12.66□□□□□ -0.38
PTPRR-201ENST00000283228 SKOR1P84550 965 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 RTN1Q16799 776 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 GKAP1Q5VSY0 366 aaPredicted RBP12.66□□□□□ -0.38
PTPRR-201ENST00000283228 CAPRIN2Q6IMN6 1127 aaKnown RBP12.66□□□□□ -0.38
PTPRR-201ENST00000283228 SNX12Q9UMY4 172 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 CAPN6Q9Y6Q1 641 aa12.66□□□□□ -0.38
PTPRR-201ENST00000283228 DLC1Q96QB1 1528 aa12.65□□□□□ -0.38
PTPRR-201ENST00000283228 A0A087X0B3 334 aa12.65□□□□□ -0.38
PTPRR-201ENST00000283228 TLDC2A0PJX2 215 aa12.65□□□□□ -0.38
PTPRR-201ENST00000283228 PPP1R3GB7ZBB8 358 aa12.65□□□□□ -0.38
PTPRR-201ENST00000283228 DNM1LO00429 736 aa12.65□□□□□ -0.38
PTPRR-201ENST00000283228 PRDM1O75626 825 aa12.65□□□□□ -0.38
PTPRR-201ENST00000283228 RASSF9O75901 435 aa12.65□□□□□ -0.38
PTPRR-201ENST00000283228 ZAP70P43403 619 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms