RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 FBXO2Q9UK22 296 aaPredicted RBP24.04■■□□□ 1.44
YBX3-202ENST00000279550 PALM3A6NDB9 673 aaPredicted RBP24.03■■□□□ 1.44
YBX3-202ENST00000279550 WNT7AO00755 349 aa24.03■■□□□ 1.44
YBX3-202ENST00000279550 ADCY5O95622 1261 aa24.03■■□□□ 1.44
YBX3-202ENST00000279550 GRIN1Q05586 938 aa24.03■■□□□ 1.44
YBX3-202ENST00000279550 C11orf57Q6ZUT1 292 aaPredicted RBP24.03■■□□□ 1.44
YBX3-202ENST00000279550 MIGA2Q7L4E1 593 aa24.03■■□□□ 1.44
YBX3-202ENST00000279550 GREB1LQ9C091 1923 aaPredicted RBP24.03■■□□□ 1.44
YBX3-202ENST00000279550 CYTH3O43739 400 aa24.02■■□□□ 1.44
YBX3-202ENST00000279550 KRI1Q8N9T8 703 aaKnown RBP24.02■■□□□ 1.44
YBX3-202ENST00000279550 SDF4Q9BRK5 362 aa24.02■■□□□ 1.44
YBX3-202ENST00000279550 PITPNM2Q9BZ72 1349 aa24.02■■□□□ 1.44
YBX3-202ENST00000279550 ESPNB1AK53 854 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 GDF11O95390 407 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 GOLGA8HP0CJ92 632 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 GNAQP50148 359 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 RRP1BQ14684 758 aaKnown RBP24.01■■□□□ 1.43
YBX3-202ENST00000279550 ABCB5Q2M3G0 1257 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 SHROOM1Q2M3G4 852 aaPredicted RBP24.01■■□□□ 1.43
YBX3-202ENST00000279550 TMEM179Q6ZVK1 233 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 GPKOWQ92917 476 aaPredicted RBP eCLIP24.01■■□□□ 1.43
YBX3-202ENST00000279550 TTLL1O95922 423 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 TOP1P11387 765 aaKnown RBP24.01■■□□□ 1.43
YBX3-202ENST00000279550 PTPREP23469 700 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 STX1AQ16623 288 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 CLEC10AQ8IUN9 316 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 CPVLQ9H3G5 476 aa24.01■■□□□ 1.43
YBX3-202ENST00000279550 EPHX2P34913 555 aa24■■□□□ 1.43
YBX3-202ENST00000279550 SYKP43405 635 aa24■■□□□ 1.43
YBX3-202ENST00000279550 NLRP5P59047 1200 aa24■■□□□ 1.43
YBX3-202ENST00000279550 USP50Q70EL3 339 aaPredicted RBP24■■□□□ 1.43
YBX3-202ENST00000279550 BRMS1Q9HCU9 246 aa24■■□□□ 1.43
YBX3-202ENST00000279550 PPP2R3BQ9Y5P8 575 aa24■■□□□ 1.43
YBX3-202ENST00000279550 TRIM75PA6NK02 468 aa23.99■■□□□ 1.43
YBX3-202ENST00000279550 ZNF165P49910 485 aa23.99■■□□□ 1.43
YBX3-202ENST00000279550 SPECC1Q5M775 1068 aa23.99■■□□□ 1.43
YBX3-202ENST00000279550 PPP4R3BQ5MIZ7 849 aa23.99■■□□□ 1.43
YBX3-202ENST00000279550 TYW1BQ6NUM6 668 aa23.99■■□□□ 1.43
YBX3-202ENST00000279550 KANSL2Q9H9L4 492 aa23.99■■□□□ 1.43
YBX3-202ENST00000279550 GH2P01242 217 aa23.98■■□□□ 1.43
YBX3-202ENST00000279550 JAG1P78504 1218 aa23.98■■□□□ 1.43
YBX3-202ENST00000279550 SEPT2Q15019 361 aa23.98■■□□□ 1.43
YBX3-202ENST00000279550 NBPF12Q5TAG4 269 aaPredicted RBP23.98■■□□□ 1.43
YBX3-202ENST00000279550 CLIP2Q9UDT6 1046 aa23.98■■□□□ 1.43
YBX3-202ENST00000279550 IQCA1LA6NCM1 817 aa23.98■■□□□ 1.43
YBX3-202ENST00000279550 HS1BP3Q53T59 392 aa23.98■■□□□ 1.43
YBX3-202ENST00000279550 WWC2Q6AWC2 1192 aa23.98■■□□□ 1.43
YBX3-202ENST00000279550 USP17L2Q6R6M4 530 aa23.98■■□□□ 1.43
YBX3-202ENST00000279550 TIGD1Q96MW7 591 aa23.98■■□□□ 1.43
YBX3-202ENST00000279550 KIAA1468Q9P260 1216 aa23.98■■□□□ 1.43
YBX3-202ENST00000279550 KLRF2D3W0D1 207 aa23.97■■□□□ 1.43
YBX3-202ENST00000279550 PLCB2Q00722 1185 aa23.97■■□□□ 1.43
YBX3-202ENST00000279550 IQCB1Q15051 598 aa23.97■■□□□ 1.43
YBX3-202ENST00000279550 DCPSQ96C86 337 aaKnown RBP23.97■■□□□ 1.43
YBX3-202ENST00000279550 SH3GLB2Q9NR46 395 aa23.97■■□□□ 1.43
YBX3-202ENST00000279550 SRPRBQ9Y5M8 271 aaKnown RBP23.97■■□□□ 1.43
YBX3-202ENST00000279550 USP17L5A8MUK1 530 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 PARP1P09874 1014 aaKnown RBP23.96■■□□□ 1.43
YBX3-202ENST00000279550 ICA1Q05084 483 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 PRAMEF18Q5VWM3 479 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 LZTS2Q9BRK4 669 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 SPZ1Q9BXG8 430 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 NYAP2Q9P242 653 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 CEP131Q9UPN4 1083 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 SCN4AP35499 1836 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 PHF20L1A8MW92 1017 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 POTECB2RU33 542 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 CAP2P40123 477 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 LRRC47Q8N1G4 583 aaKnown RBP23.96■■□□□ 1.43
YBX3-202ENST00000279550 HOOK2Q96ED9 719 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 TAF1DQ9H5J8 278 aaPredicted RBP23.96■■□□□ 1.43
YBX3-202ENST00000279550 ANO10Q9NW15 660 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 CCDC39Q9UFE4 941 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 KCNH3Q9ULD8 1083 aa23.96■■□□□ 1.43
YBX3-202ENST00000279550 NOL7Q9UMY1 257 aaKnown RBP23.96■■□□□ 1.43
YBX3-202ENST00000279550 MORC2Q9Y6X9 1032 aaPredicted RBP23.96■■□□□ 1.43
YBX3-202ENST00000279550 WDR90Q96KV7 1748 aa23.95■■□□□ 1.42
YBX3-202ENST00000279550 STXBP3O00186 592 aa23.95■■□□□ 1.42
YBX3-202ENST00000279550 EEF2P13639 858 aaKnown RBP23.95■■□□□ 1.42
YBX3-202ENST00000279550 ATP2B2Q01814 1243 aa23.95■■□□□ 1.42
YBX3-202ENST00000279550 ZNF174Q15697 407 aa23.95■■□□□ 1.42
YBX3-202ENST00000279550 TTC38Q5R3I4 469 aa23.95■■□□□ 1.42
YBX3-202ENST00000279550 PIK3AP1Q6ZUJ8 805 aa23.95■■□□□ 1.42
YBX3-202ENST00000279550 BLIDQ8IZY5 108 aa23.95■■□□□ 1.42
YBX3-202ENST00000279550 ZC3H15Q8WU90 426 aaKnown RBP23.95■■□□□ 1.42
YBX3-202ENST00000279550 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.95■■□□□ 1.42
YBX3-202ENST00000279550 ZBTB21Q9ULJ3 1066 aa23.95■■□□□ 1.42
YBX3-202ENST00000279550 CAVIN2O95810 425 aa23.94■■□□□ 1.42
YBX3-202ENST00000279550 LONRF3Q496Y0 759 aa23.94■■□□□ 1.42
YBX3-202ENST00000279550 DCAF15Q66K64 600 aa23.94■■□□□ 1.42
YBX3-202ENST00000279550 HEATR3Q7Z4Q2 680 aa23.94■■□□□ 1.42
YBX3-202ENST00000279550 ZSCAN30Q86W11 494 aa23.94■■□□□ 1.42
YBX3-202ENST00000279550 SIAH1Q8IUQ4 282 aa23.94■■□□□ 1.42
YBX3-202ENST00000279550 SULF1Q8IWU6 871 aa23.94■■□□□ 1.42
YBX3-202ENST00000279550 MKL1Q969V6 931 aa23.94■■□□□ 1.42
YBX3-202ENST00000279550 CSRNP2Q9H175 543 aa23.94■■□□□ 1.42
YBX3-202ENST00000279550 CALML3P27482 149 aa23.93■■□□□ 1.42
YBX3-202ENST00000279550 USP49Q70CQ1 688 aa23.93■■□□□ 1.42
YBX3-202ENST00000279550 ZNF579Q8NAF0 562 aaKnown RBP23.93■■□□□ 1.42
YBX3-202ENST00000279550 RASGRP4Q8TDF6 673 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms