RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ZNF277Q9NRM2 450 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-201ENST00000279247 SUGT1Q9Y2Z0 365 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 FAM237AA0A1B0GTK4 181 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 SOGA3Q5TF21 947 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 CCDC148Q8NFR7 591 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 CACTINQ8WUQ7 758 aaKnown RBP20.43■□□□□ 0.86
CAPN1-201ENST00000279247 UIMC1Q96RL1 719 aa20.43■□□□□ 0.86
CAPN1-201ENST00000279247 IGSF3O75054 1194 aa20.42■□□□□ 0.86
CAPN1-201ENST00000279247 OFD1O75665 1012 aa20.42■□□□□ 0.86
CAPN1-201ENST00000279247 NCAPHQ15003 741 aa20.42■□□□□ 0.86
CAPN1-201ENST00000279247 C7orf43Q8WVR3 580 aa20.42■□□□□ 0.86
CAPN1-201ENST00000279247 UPF1Q92900 1129 aaKnown RBP eCLIP20.42■□□□□ 0.862e-10■■■■□ 24.6
CAPN1-201ENST00000279247 TMEM60Q9H2L4 133 aa20.42■□□□□ 0.86
CAPN1-201ENST00000279247 TMEM260Q9NX78 707 aa20.42■□□□□ 0.86
CAPN1-201ENST00000279247 ATP2C1P98194 919 aaPredicted RBP20.42■□□□□ 0.86
CAPN1-201ENST00000279247 STRIP1Q5VSL9 837 aa20.42■□□□□ 0.86
CAPN1-201ENST00000279247 ZNF579Q8NAF0 562 aaKnown RBP20.42■□□□□ 0.86
CAPN1-201ENST00000279247 TPM4P67936 248 aa20.41■□□□□ 0.86
CAPN1-201ENST00000279247 MDM2Q00987 491 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-201ENST00000279247 TTLL6Q8N841 843 aa20.41■□□□□ 0.86
CAPN1-201ENST00000279247 FANCLQ9NW38 375 aa20.41■□□□□ 0.86
CAPN1-201ENST00000279247 SCAF8Q9UPN6 1271 aaKnown RBP20.41■□□□□ 0.86
CAPN1-201ENST00000279247 CLRN2A0PK11 232 aa20.41■□□□□ 0.86
CAPN1-201ENST00000279247 SERPINC1P01008 464 aa20.41■□□□□ 0.86
CAPN1-201ENST00000279247 STX17P56962 302 aa20.41■□□□□ 0.86
CAPN1-201ENST00000279247 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-201ENST00000279247 FERMT2Q96AC1 680 aa20.41■□□□□ 0.86
CAPN1-201ENST00000279247 DNAJC18Q9H819 358 aa20.41■□□□□ 0.86
CAPN1-201ENST00000279247 ZBTB12Q9Y330 459 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-201ENST00000279247 TTLL1O95922 423 aa20.4■□□□□ 0.86
CAPN1-201ENST00000279247 RGPD3A6NKT7 1758 aaPredicted RBP20.4■□□□□ 0.86
CAPN1-201ENST00000279247 RGPD4Q7Z3J3 1758 aa20.4■□□□□ 0.86
CAPN1-201ENST00000279247 YDJCA8MPS7 323 aa20.4■□□□□ 0.86
CAPN1-201ENST00000279247 KARSQ15046 597 aaKnown RBP20.4■□□□□ 0.86
CAPN1-201ENST00000279247 TMC6Q7Z403 805 aa20.4■□□□□ 0.86
CAPN1-201ENST00000279247 FAM198AQ9UFP1 575 aa20.4■□□□□ 0.86
CAPN1-201ENST00000279247 SMTNL1A8MU46 457 aa20.4■□□□□ 0.86
CAPN1-201ENST00000279247 CCNT1O60563 726 aaKnown RBP20.4■□□□□ 0.86
CAPN1-201ENST00000279247 SARM1Q6SZW1 724 aa20.4■□□□□ 0.86
CAPN1-201ENST00000279247 ZDHHC15Q96MV8 337 aa20.4■□□□□ 0.86
CAPN1-201ENST00000279247 MYL5Q02045 173 aa20.39■□□□□ 0.85
CAPN1-201ENST00000279247 PRMT6Q96LA8 375 aaPredicted RBP20.39■□□□□ 0.85
CAPN1-201ENST00000279247 SPZ1Q9BXG8 430 aa20.39■□□□□ 0.85
CAPN1-201ENST00000279247 TCP10L2B9ZVM9 353 aa20.39■□□□□ 0.85
CAPN1-201ENST00000279247 BMP15O95972 392 aa20.39■□□□□ 0.85
CAPN1-201ENST00000279247 FMR1Q06787 632 aaKnown RBP eCLIP20.39■□□□□ 0.851e-6■■■□□ 16.5
CAPN1-201ENST00000279247 CFAP100Q494V2 611 aa20.39■□□□□ 0.85
CAPN1-201ENST00000279247 SAMD1Q6SPF0 538 aaPredicted RBP20.39■□□□□ 0.85
CAPN1-201ENST00000279247 DPF2Q92785 391 aa20.39■□□□□ 0.85
CAPN1-201ENST00000279247 PAGE5Q96GU1 130 aa20.39■□□□□ 0.85
CAPN1-201ENST00000279247 SNAP25P60880 206 aa20.38■□□□□ 0.85
CAPN1-201ENST00000279247 FANCCQ00597 558 aa20.38■□□□□ 0.85
CAPN1-201ENST00000279247 CREBRFQ8IUR6 639 aa20.38■□□□□ 0.85
CAPN1-201ENST00000279247 MRFAP1L1Q96HT8 127 aa20.38■□□□□ 0.85
CAPN1-201ENST00000279247 SH3GLB2Q9NR46 395 aa20.38■□□□□ 0.85
CAPN1-201ENST00000279247 SH3BP5LQ7L8J4 393 aa20.38■□□□□ 0.85
CAPN1-201ENST00000279247 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.38■□□□□ 0.85
CAPN1-201ENST00000279247 LARGE2Q8N3Y3 721 aa20.38■□□□□ 0.85
CAPN1-201ENST00000279247 LZTS2Q9BRK4 669 aa20.38■□□□□ 0.85
CAPN1-201ENST00000279247 C6orf50Q9HD87 102 aa20.38■□□□□ 0.85
CAPN1-201ENST00000279247 CERKLQ49MI3 558 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-201ENST00000279247 KIAA1524Q8TCG1 905 aa20.37■□□□□ 0.85
CAPN1-201ENST00000279247 MYH8P13535 1937 aa20.37■□□□□ 0.85
CAPN1-201ENST00000279247 SLFN14P0C7P3 912 aa20.37■□□□□ 0.85
CAPN1-201ENST00000279247 CDK11BP21127 795 aaKnown RBP20.37■□□□□ 0.85
CAPN1-201ENST00000279247 SEPT2Q15019 361 aa20.37■□□□□ 0.85
CAPN1-201ENST00000279247 MAPK8IP1Q9UQF2 711 aa20.37■□□□□ 0.85
CAPN1-201ENST00000279247 TRAPPC10P48553 1259 aa20.37■□□□□ 0.85
CAPN1-201ENST00000279247 IKQ13123 557 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-201ENST00000279247 DHX8Q14562 1220 aaKnown RBP20.37■□□□□ 0.85
CAPN1-201ENST00000279247 UBE2SQ16763 222 aa20.37■□□□□ 0.85
CAPN1-201ENST00000279247 NUP88Q99567 741 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-201ENST00000279247 USP17L10C9JJH3 530 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 UBASH3AP57075 661 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 DTHD1Q6ZMT9 781 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 TBCKQ8TEA7 893 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 HSD3B7Q9H2F3 369 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 SWAP70Q9UH65 585 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 NFE2L3Q9Y4A8 694 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 TPM3P06753 285 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 EEF2P13639 858 aaKnown RBP20.36■□□□□ 0.85
CAPN1-201ENST00000279247 GOLGA8FQ08AF8 430 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 GOLGA8DPQ0D2H9 430 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 ADGRF4Q8IZF3 695 aa20.36■□□□□ 0.85
CAPN1-201ENST00000279247 NONOQ15233 471 aaKnown RBP eCLIP20.35■□□□□ 0.85
CAPN1-201ENST00000279247 REXO1Q8N1G1 1221 aaKnown RBP20.35■□□□□ 0.85
CAPN1-201ENST00000279247 SLC16A10Q8TF71 515 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 BPIFA3Q9BQP9 254 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 ZMYND12Q9H0C1 365 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 M0R2N6 131 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 POLD1P28340 1107 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 TNNI2P48788 182 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 KANK3Q6NY19 840 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 CCDC12Q8WUD4 166 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-201ENST00000279247 CCDC34Q96HJ3 373 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 VEZTQ9HBM0 779 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 PI4KBQ9UBF8 816 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 TAL1P17542 331 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-201ENST00000279247 GNA11P29992 359 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 CCDC125Q86Z20 511 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms