RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 NYAP2Q9P242 653 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 ZNF174Q15697 407 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 FAM83BQ5T0W9 1011 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 FKBP1CQ5VVH2 108 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 USP49Q70CQ1 688 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 BRAPQ7Z569 592 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 SPZ1Q9BXG8 430 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 RIOX1Q9H6W3 641 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 TMEM232C9JQI7 657 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 KRT2P35908 639 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 SKOR2Q2VWA4 1001 aaPredicted RBP13.47□□□□□ -0.25
SSRP1-201ENST00000278412 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 PANK2Q9BZ23 570 aa13.47□□□□□ -0.25
SSRP1-201ENST00000278412 COL2A1P02458 1487 aaPredicted RBP13.46□□□□□ -0.25
SSRP1-201ENST00000278412 NAPAP54920 295 aa13.46□□□□□ -0.25
SSRP1-201ENST00000278412 UBE2SQ16763 222 aa13.46□□□□□ -0.25
SSRP1-201ENST00000278412 AXDND1Q5T1B0 1012 aaPredicted RBP13.46□□□□□ -0.25
SSRP1-201ENST00000278412 CKAP2LQ8IYA6 745 aa13.46□□□□□ -0.25
SSRP1-201ENST00000278412 MKL1Q969V6 931 aa13.46□□□□□ -0.25
SSRP1-201ENST00000278412 ZNF341Q9BYN7 854 aa13.46□□□□□ -0.25
SSRP1-201ENST00000278412 BARHL2Q9NY43 387 aa13.46□□□□□ -0.25
SSRP1-201ENST00000278412 BIN2Q9UBW5 565 aaPredicted RBP13.46□□□□□ -0.25
SSRP1-201ENST00000278412 CFAP45Q9UL16 551 aa13.46□□□□□ -0.25
SSRP1-201ENST00000278412 ELP1O95163 1332 aa13.46□□□□□ -0.25
SSRP1-201ENST00000278412 SPTLC2O15270 562 aa13.46□□□□□ -0.25
SSRP1-201ENST00000278412 IKQ13123 557 aaPredicted RBP13.46□□□□□ -0.25
SSRP1-201ENST00000278412 SAFBQ15424 915 aaKnown RBP eCLIP13.46□□□□□ -0.25
SSRP1-201ENST00000278412 CCAR1Q8IX12 1150 aaKnown RBP13.46□□□□□ -0.25
SSRP1-201ENST00000278412 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
SSRP1-201ENST00000278412 ZNF396Q96N95 335 aaPredicted RBP13.46□□□□□ -0.25
SSRP1-201ENST00000278412 ATAD5Q96QE3 1844 aa13.46□□□□□ -0.26
SSRP1-201ENST00000278412 NASPP49321 788 aaPredicted RBP13.45□□□□□ -0.26
SSRP1-201ENST00000278412 USH1GQ495M9 461 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 JAKMIP3Q5VZ66 844 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 FOXP1Q9H334 677 aaPredicted RBP13.45□□□□□ -0.26
SSRP1-201ENST00000278412 POLR3EQ9NVU0 708 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 PCDHA6Q9UN73 950 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 PCDHA8Q9Y5H6 950 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 GOLGA6L4A6NEF3 574 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 NDUFA8P51970 172 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 INF2Q27J81 1249 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 QRICH1Q2TAL8 776 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 ASPRV1Q53RT3 343 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 P2RX7Q99572 595 aaKnown RBP13.45□□□□□ -0.26
SSRP1-201ENST00000278412 SMCO2A6NFE2 343 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 M0R2N6 131 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 TNNI2P48788 182 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 GNAQP50148 359 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 SHC4Q6S5L8 630 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 BLIDQ8IZY5 108 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 WRNIP1Q96S55 665 aa13.45□□□□□ -0.26
SSRP1-201ENST00000278412 PEX10O60683 326 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 MBD3O95983 291 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 SNW1Q13573 536 aaKnown RBP13.44□□□□□ -0.26
SSRP1-201ENST00000278412 SLC39A14Q15043 492 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 RNF214Q8ND24 703 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 GJA10Q969M2 543 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 POTECB2RU33 542 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 USP17L15C9J2P7 530 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 USP17L13C9JLJ4 530 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 USP17L11C9JVI0 530 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 USP17L18D6R9N7 530 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 USP17L22D6RA61 530 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 USP17L17D6RBQ6 530 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 USP17L19D6RCP7 530 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 USP17L20D6RJB6 530 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 EDIL3O43854 480 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 CDC25AP30304 524 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 MCM7P33993 719 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 MAP3K10Q02779 954 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 USP17L24Q0WX57 530 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 CDC37Q16543 378 aaPredicted RBP13.44□□□□□ -0.26
SSRP1-201ENST00000278412 USP17L6PQ6QN14 398 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 SEC63Q9UGP8 760 aaKnown RBP13.44□□□□□ -0.26
SSRP1-201ENST00000278412 PCDHA4Q9UN74 947 aa13.44□□□□□ -0.26
SSRP1-201ENST00000278412 TBC1D12O60347 775 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
SSRP1-201ENST00000278412 EAPPQ56P03 285 aaPredicted RBP13.43□□□□□ -0.26
SSRP1-201ENST00000278412 KIFC2Q96AC6 838 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 WNK4Q96J92 1243 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 TMX2Q9Y320 296 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 TRIM75PA6NK02 468 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 MTMR2Q13614 643 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 TNFAIP1Q13829 316 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 IL17AQ16552 155 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 CCDC174Q6PII3 467 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 TBC1D5Q92609 795 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 RBSNQ9H1K0 784 aa13.43□□□□□ -0.26
SSRP1-201ENST00000278412 BMP3P12645 472 aa13.42□□□□□ -0.26
SSRP1-201ENST00000278412 XBP1P17861 261 aa13.42□□□□□ -0.26
SSRP1-201ENST00000278412 SPP2Q13103 211 aa13.42□□□□□ -0.26
SSRP1-201ENST00000278412 ZFP91Q96JP5 570 aaPredicted RBP13.42□□□□□ -0.26
SSRP1-201ENST00000278412 FEZ1Q99689 392 aa13.42□□□□□ -0.26
SSRP1-201ENST00000278412 PRR12Q9ULL5 1215 aa13.42□□□□□ -0.26
SSRP1-201ENST00000278412 GMCL1P1Q8NEA9 526 aa13.42□□□□□ -0.26
SSRP1-201ENST00000278412 TMEM60Q9H2L4 133 aa13.42□□□□□ -0.26
SSRP1-201ENST00000278412 FSD2A1L4K1 749 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 ZBTB5O15062 677 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 YEATS4O95619 227 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms