RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 C6orf50Q9HD87 102 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 VWA3AA6NCI4 1184 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 SMTNL1A8MU46 457 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 GOLGA6L6A8MZA4 724 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 TPM3P06753 285 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 GNA11P29992 359 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 SARSP49591 514 aaKnown RBP10.93□□□□□ -0.66
TRIM55-201ENST00000276573 POSTNQ15063 836 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 IL17AQ16552 155 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 ARL6IP4Q66PJ3 421 aaKnown RBP10.93□□□□□ -0.66
TRIM55-201ENST00000276573 RSBN1LQ6PCB5 846 aaPredicted RBP10.93□□□□□ -0.66
TRIM55-201ENST00000276573 ZSCAN29Q8IWY8 852 aaPredicted RBP10.93□□□□□ -0.66
TRIM55-201ENST00000276573 LARGE2Q8N3Y3 721 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 PDILTQ8N807 584 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 SPC24Q8NBT2 197 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 SYMPKQ92797 1274 aaKnown RBP10.93□□□□□ -0.66
TRIM55-201ENST00000276573 MKL1Q969V6 931 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 ZNF830Q96NB3 372 aaPredicted RBP10.93□□□□□ -0.66
TRIM55-201ENST00000276573 GMLQ99445 158 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 GPCPD1Q9NPB8 672 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 NYAP2Q9P242 653 aa10.93□□□□□ -0.66
TRIM55-201ENST00000276573 A0A087X0B3 334 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 FAM196BA6NMK8 535 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 hCG_1984214I3L0E3 225 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 RAD17O75943 681 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 SOGA3Q5TF21 947 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 NT5DC1Q5TFE4 455 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 KRT25Q7Z3Z0 450 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 ZNF713Q8N859 430 aaPredicted RBP10.92□□□□□ -0.66
TRIM55-201ENST00000276573 KANSL2Q9H9L4 492 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 ZNF277Q9NRM2 450 aaPredicted RBP10.92□□□□□ -0.66
TRIM55-201ENST00000276573 ESYT2A0FGR8 921 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 PSMD14O00487 310 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 IKBKBO14920 756 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 SLFN14P0C7P3 912 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 CDC25BP30305 580 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 ATP2B2Q01814 1243 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 NCAPHQ15003 741 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 INF2Q27J81 1249 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 GPATCH4Q5T3I0 446 aaKnown RBP10.92□□□□□ -0.66
TRIM55-201ENST00000276573 DHX58Q96C10 678 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 MRFAP1L1Q96HT8 127 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 TRIM34Q9BYJ4 488 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 TTC12Q9H892 705 aaPredicted RBP10.92□□□□□ -0.66
TRIM55-201ENST00000276573 MYH8P13535 1937 aa10.92□□□□□ -0.66
TRIM55-201ENST00000276573 PNMA6FA0A0J9YX94 578 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 EEF2P13639 858 aaKnown RBP10.91□□□□□ -0.66
TRIM55-201ENST00000276573 LONP1P36776 959 aaKnown RBP10.91□□□□□ -0.66
TRIM55-201ENST00000276573 TGFB2P61812 414 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 TTBK2Q6IQ55 1244 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 SH3RF1Q7Z6J0 888 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 SIAH1Q8IUQ4 282 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 DRC7Q8IY82 874 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 ADGRF4Q8IZF3 695 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 SPATA20Q8TB22 786 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 CCDC34Q96HJ3 373 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 JMJD4Q9H9V9 463 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 MAN1B1Q9UKM7 699 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 HDAC9Q9UKV0 1011 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 GREB1LQ9C091 1923 aaPredicted RBP10.91□□□□□ -0.66
TRIM55-201ENST00000276573 ATRNL1Q5VV63 1379 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 SIPA1L1O43166 1804 aa10.91□□□□□ -0.66
TRIM55-201ENST00000276573 SPDYE2BA6NHP3 402 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 SPDYE6P0CI01 402 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 BMP6P22004 513 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 NONOQ15233 471 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRIM55-201ENST00000276573 SHROOM1Q2M3G4 852 aaPredicted RBP10.9□□□□□ -0.66
TRIM55-201ENST00000276573 GRAMD1CQ8IYS0 662 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 SMARCE1Q969G3 411 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 COA7Q96BR5 231 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 MTMR8Q96EF0 704 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 PAGE5Q96GU1 130 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 PIM2Q9P1W9 311 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 LAD1O00515 517 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 TPM4P67936 248 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 MORC3Q14149 939 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 SEPT2Q15019 361 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 DLGAP5Q15398 846 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 CCDC96Q2M329 555 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 ABCB5Q2M3G0 1257 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 DTHD1Q6ZMT9 781 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 TMEM179Q6ZVK1 233 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 CCDC186Q7Z3E2 898 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 CCDC125Q86Z20 511 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 TRIML1Q8N9V2 468 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 PYM1Q9BRP8 204 aaKnown RBP10.9□□□□□ -0.66
TRIM55-201ENST00000276573 TMEM60Q9H2L4 133 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 BIN2Q9UBW5 565 aaPredicted RBP10.9□□□□□ -0.66
TRIM55-201ENST00000276573 ZNF70Q9UC06 446 aaPredicted RBP10.9□□□□□ -0.66
TRIM55-201ENST00000276573 NRBP1Q9UHY1 535 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 ZNRF3Q9ULT6 936 aa10.9□□□□□ -0.66
TRIM55-201ENST00000276573 SMC2O95347 1197 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 ZBTB7AO95365 584 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 SLC16A2P36021 539 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 PRPHP41219 470 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 E2F4Q16254 413 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 SLFN13Q68D06 897 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 KCTD1Q719H9 257 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 OGFOD1Q8N543 542 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms