RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 GOLGA6DP0CG33 693 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 MORC3Q14149 939 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 KCNJ12Q14500 433 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 TRIM50Q86XT4 487 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 PUS3Q9BZE2 481 aaKnown RBP13.09□□□□□ -0.31
SHPRH-201ENST00000275233 GOLGA6AQ9NYA3 693 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 ASAP1Q9ULH1 1129 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 PFKFB1P16118 471 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 CRKLP46109 303 aaKnown RBP13.09□□□□□ -0.31
SHPRH-201ENST00000275233 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 TUBB4BP68371 445 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 ATP11AP98196 1134 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 ABCB5Q2M3G0 1257 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 SYCE1Q8N0S2 351 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 PGBD1Q96JS3 809 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 SEPT9Q9UHD8 586 aaPredicted RBP13.09□□□□□ -0.31
SHPRH-201ENST00000275233 CEP128Q6ZU80 1094 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.09□□□□□ -0.31
SHPRH-201ENST00000275233 MYOCDQ8IZQ8 938 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 NR1I2O75469 434 aa13.08□□□□□ -0.31
SHPRH-201ENST00000275233 ERCC6LQ2NKX8 1250 aa13.08□□□□□ -0.31
SHPRH-201ENST00000275233 RILPQ96NA2 401 aa13.08□□□□□ -0.31
SHPRH-201ENST00000275233 PHKA1P46020 1223 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 TSTA3Q13630 321 aaPredicted RBP13.08□□□□□ -0.32
SHPRH-201ENST00000275233 TMTC1Q8IUR5 882 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 GABPB2Q8TAK5 448 aaPredicted RBP13.08□□□□□ -0.32
SHPRH-201ENST00000275233 TEKT3Q9BXF9 490 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 SLFN13Q68D06 897 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 DPP9Q86TI2 863 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 PALM2Q8IXS6 379 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 AFAP1L2Q8N4X5 818 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 XPO4Q9C0E2 1151 aaKnown RBP13.08□□□□□ -0.32
SHPRH-201ENST00000275233 ZBTB24O43167 697 aaPredicted RBP13.08□□□□□ -0.32
SHPRH-201ENST00000275233 GDF11O95390 407 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 PIK3CAP42336 1068 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 DESI2Q9BSY9 194 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 HSPD1P10809 573 aaKnown RBP13.08□□□□□ -0.32
SHPRH-201ENST00000275233 NDUFAB1O14561 156 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 KCNK3O14649 394 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 DMP1Q13316 513 aaPredicted RBP13.08□□□□□ -0.32
SHPRH-201ENST00000275233 DCAF15Q66K64 600 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 FAM178BQ8IXR5 827 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 NME8Q8N427 588 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 ERO1AQ96HE7 468 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 KRT12Q99456 494 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 RAB20Q9NX57 234 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 AMFRQ9UKV5 643 aa13.08□□□□□ -0.32
SHPRH-201ENST00000275233 MAGED2Q9UNF1 606 aaPredicted RBP13.08□□□□□ -0.32
SHPRH-201ENST00000275233 I3L4J1 428 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
SHPRH-201ENST00000275233 CFAP221Q4G0U5 840 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 ARMCX5Q6P1M9 558 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 PPM1KQ8N3J5 372 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 FANCBQ8NB91 859 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 EAF2Q96CJ1 260 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-201ENST00000275233 ADPGKQ9BRR6 497 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 AKT3Q9Y243 479 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 SLC16A2P36021 539 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 STAT1P42224 750 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 PPFIBP2Q8ND30 876 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 FGAP02671 866 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 NXNQ6DKJ4 435 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 NOSTRINQ8IVI9 506 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 UHMK1Q8TAS1 419 aaKnown RBP13.07□□□□□ -0.32
SHPRH-201ENST00000275233 SKA2Q8WVK7 121 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-201ENST00000275233 SWAP70Q9UH65 585 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 ATP10AO60312 1499 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 ZMYM6O95789 1325 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 POLR2FP61218 127 aaKnown RBP13.07□□□□□ -0.32
SHPRH-201ENST00000275233 DENND2CQ68D51 928 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 SND1Q7KZF4 910 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHPRH-201ENST00000275233 TAOK1Q7L7X3 1001 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 MCUR1Q96AQ8 359 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 NBPF3Q9H094 633 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 DISC1Q9NRI5 854 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 TPCN1Q9ULQ1 816 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 UBN2Q6ZU65 1347 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 GOLGA6BA6NDN3 693 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 SIK1P57059 783 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 YWHAEP62258 255 aaKnown RBP13.07□□□□□ -0.32
SHPRH-201ENST00000275233 NEK8Q86SG6 692 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 CLIC4Q9Y696 253 aa13.07□□□□□ -0.32
SHPRH-201ENST00000275233 PPP2R5BQ15173 497 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 CCDC62Q6P9F0 684 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 EEPD1Q7L9B9 569 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 RASGRP4Q8TDF6 673 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 POMGNT1Q8WZA1 660 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 CSRNP1Q96S65 589 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-201ENST00000275233 ZMYM4Q5VZL5 1548 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 PER1O15534 1290 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-201ENST00000275233 OR52Z1P0C646 297 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 SRGAP1Q7Z6B7 1085 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 SLFN12Q8IYM2 578 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 SCYL1Q96KG9 808 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 ERFEQ4G0M1 354 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms