RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ENAHQ8N8S7 591 aaPredicted RBP14.47□□□□□ -0.09
COL8A1-202ENST00000273342 CTCFLQ8NI51 663 aaPredicted RBP14.47□□□□□ -0.09
COL8A1-202ENST00000273342 MYO1AQ9UBC5 1043 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 FAM169AQ9Y6X4 670 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 ITIH6Q6UXX5 1313 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 ZC3H4Q9UPT8 1303 aaKnown RBP14.47□□□□□ -0.09
COL8A1-202ENST00000273342 ERLIN2O94905 339 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 STAT6P42226 847 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 VGLL2Q8N8G2 317 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 PHF20Q9BVI0 1012 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 MLXIPQ9HAP2 919 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 LRWD1Q9UFC0 647 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 SPATA31A3Q5VYP0 1347 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 PSMD14O00487 310 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 EBAG9O00559 213 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 KRT86O43790 486 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 NLRP10Q86W26 655 aa14.47□□□□□ -0.09
COL8A1-202ENST00000273342 NHEJ1Q9H9Q4 299 aaPredicted RBP14.47□□□□□ -0.09
COL8A1-202ENST00000273342 NCK2O43639 380 aa14.46□□□□□ -0.09
COL8A1-202ENST00000273342 MNAT1P51948 309 aa14.46□□□□□ -0.09
COL8A1-202ENST00000273342 RNASE9P60153 205 aaKnown RBP14.46□□□□□ -0.09
COL8A1-202ENST00000273342 PDCLQ13371 301 aa14.46□□□□□ -0.09
COL8A1-202ENST00000273342 HPS3Q969F9 1004 aa14.46□□□□□ -0.09
COL8A1-202ENST00000273342 FERMT2Q96AC1 680 aa14.46□□□□□ -0.09
COL8A1-202ENST00000273342 CAPS2Q9BXY5 557 aa14.46□□□□□ -0.09
COL8A1-202ENST00000273342 FAM107BQ9H098 131 aa14.46□□□□□ -0.09
COL8A1-202ENST00000273342 BRMS1Q9HCU9 246 aa14.46□□□□□ -0.09
COL8A1-202ENST00000273342 ATP2B2Q01814 1243 aa14.46□□□□□ -0.1
COL8A1-202ENST00000273342 FAM47AQ5JRC9 791 aa14.46□□□□□ -0.1
COL8A1-202ENST00000273342 PDXDC2PQ6P474 469 aa14.46□□□□□ -0.1
COL8A1-202ENST00000273342 ANKRD18AQ8IVF6 992 aa14.46□□□□□ -0.1
COL8A1-202ENST00000273342 EFCAB13Q8IY85 973 aa14.46□□□□□ -0.1
COL8A1-202ENST00000273342 STAG1Q8WVM7 1258 aa14.46□□□□□ -0.1
COL8A1-202ENST00000273342 ARL8AQ96BM9 186 aa14.46□□□□□ -0.1
COL8A1-202ENST00000273342 SCN11AQ9UI33 1791 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 TMEM94Q12767 1356 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 LRRC10BA6NIK2 292 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 SEMA3EO15041 775 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 UQCRFS1P1P0C7P4 283 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 AARSP49588 968 aaKnown RBP eCLIP14.45□□□□□ -0.1
COL8A1-202ENST00000273342 DYNLL1P63167 89 aaKnown RBP14.45□□□□□ -0.1
COL8A1-202ENST00000273342 TUBB4BP68371 445 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 SPAG1Q07617 926 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 TBC1D8BQ0IIM8 1120 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 PUM3Q15397 648 aaKnown RBP14.45□□□□□ -0.1
COL8A1-202ENST00000273342 ZNF658Q5TYW1 1059 aaPredicted RBP14.45□□□□□ -0.1
COL8A1-202ENST00000273342 NFRKBQ6P4R8 1299 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 GPKOWQ92917 476 aaPredicted RBP eCLIP14.45□□□□□ -0.1
COL8A1-202ENST00000273342 RNF26Q9BY78 433 aaPredicted RBP14.45□□□□□ -0.1
COL8A1-202ENST00000273342 MAGEC2Q9UBF1 373 aaPredicted RBP14.45□□□□□ -0.1
COL8A1-202ENST00000273342 ESYT3A0FGR9 886 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 MOCS3O95396 460 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 NAP1L1P55209 391 aaKnown RBP14.45□□□□□ -0.1
COL8A1-202ENST00000273342 TYW1BQ6NUM6 668 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 CATIPQ7Z7H3 387 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 LPIN2Q92539 896 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 ESR2Q92731 530 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 ZNHIT6Q9NWK9 470 aaKnown RBP14.45□□□□□ -0.1
COL8A1-202ENST00000273342 CAPN6Q9Y6Q1 641 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 MAP3K15Q6ZN16 1313 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 ABCC12Q96J65 1359 aa14.45□□□□□ -0.1
COL8A1-202ENST00000273342 GTPBP6O43824 516 aaPredicted RBP14.44□□□□□ -0.1
COL8A1-202ENST00000273342 FECHP22830 423 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 GUCY2CP25092 1073 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 ALX1Q15699 326 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 A0A087WUV0 522 aaPredicted RBP14.44□□□□□ -0.1
COL8A1-202ENST00000273342 KRT14P02533 472 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 TUBBP07437 444 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 ARID4AP29374 1257 aaPredicted RBP14.44□□□□□ -0.1
COL8A1-202ENST00000273342 TMTC2Q8N394 836 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 TSEN2Q8NCE0 465 aaKnown RBP14.44□□□□□ -0.1
COL8A1-202ENST00000273342 VIPAS39Q9H9C1 493 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 USP54Q70EL1 1684 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 SLIT3O75094 1523 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 KRT83P78385 493 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 ATP2C1P98194 919 aaPredicted RBP14.44□□□□□ -0.1
COL8A1-202ENST00000273342 KIF5AQ12840 1032 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 PAPD7Q5XG87 772 aaKnown RBP14.44□□□□□ -0.1
COL8A1-202ENST00000273342 PAXIP1Q6ZW49 1069 aaPredicted RBP14.44□□□□□ -0.1
COL8A1-202ENST00000273342 CSGALNACT2Q8N6G5 542 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 ZSCAN10Q96SZ4 725 aaPredicted RBP14.44□□□□□ -0.1
COL8A1-202ENST00000273342 RUFY1Q96T51 708 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 TUBGCP2Q9BSJ2 902 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 FAM207AQ9NSI2 230 aaPredicted RBP14.44□□□□□ -0.1
COL8A1-202ENST00000273342 TMOD3Q9NYL9 352 aa14.44□□□□□ -0.1
COL8A1-202ENST00000273342 ZSCAN5CA6NGD5 496 aaPredicted RBP14.43□□□□□ -0.1
COL8A1-202ENST00000273342 LGALS16A8MUM7 142 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 H0YHG0 523 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 SLC5A1P13866 664 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 MTIF2P46199 727 aaKnown RBP14.43□□□□□ -0.1
COL8A1-202ENST00000273342 CKAP4Q07065 602 aaKnown RBP14.43□□□□□ -0.1
COL8A1-202ENST00000273342 TRIM14Q14142 442 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 NPY5RQ15761 445 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 SRBD1Q8N5C6 995 aaKnown RBP14.43□□□□□ -0.1
COL8A1-202ENST00000273342 IFT81Q8WYA0 676 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 SECISBP2LQ93073 1101 aaKnown RBP14.43□□□□□ -0.1
COL8A1-202ENST00000273342 CYLC1P35663 651 aaPredicted RBP14.43□□□□□ -0.1
COL8A1-202ENST00000273342 SEC23AQ15436 765 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 ENOX2Q16206 610 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms