RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.64
RTN1-201ENST00000267484 CICQ96RK0 1608 aaPredicted RBP19.02■□□□□ 0.63
RTN1-201ENST00000267484 WHAMMP3Q1A5X7 153 aa19.02■□□□□ 0.63
RTN1-201ENST00000267484 SKIDA1Q1XH10 827 aa19.02■□□□□ 0.63
RTN1-201ENST00000267484 NKRFO15226 690 aaKnown RBP eCLIP19.01■□□□□ 0.63
RTN1-201ENST00000267484 HERVK_113P62684 666 aa19.01■□□□□ 0.63
RTN1-201ENST00000267484 PPP2R5BQ15173 497 aa19.01■□□□□ 0.63
RTN1-201ENST00000267484 MUM1L1Q5H9M0 696 aa19.01■□□□□ 0.63
RTN1-201ENST00000267484 NTSR2O95665 410 aa19.01■□□□□ 0.63
RTN1-201ENST00000267484 ATP6V1AP38606 617 aa19.01■□□□□ 0.63
RTN1-201ENST00000267484 PIP4K2BP78356 416 aa19.01■□□□□ 0.63
RTN1-201ENST00000267484 AGPAT5Q9NUQ2 364 aa19.01■□□□□ 0.63
RTN1-201ENST00000267484 DUSP10Q9Y6W6 482 aa19.01■□□□□ 0.63
RTN1-201ENST00000267484 BCL9LQ86UU0 1499 aa19■□□□□ 0.63
RTN1-201ENST00000267484 ARAP2Q8WZ64 1704 aa19■□□□□ 0.63
RTN1-201ENST00000267484 POTEB2H3BUK9 544 aa19■□□□□ 0.63
RTN1-201ENST00000267484 CCDC122Q5T0U0 273 aa19■□□□□ 0.63
RTN1-201ENST00000267484 TYW1BQ6NUM6 668 aa19■□□□□ 0.63
RTN1-201ENST00000267484 WDR59Q6PJI9 974 aa19■□□□□ 0.63
RTN1-201ENST00000267484 TRIM34Q9BYJ4 488 aa19■□□□□ 0.63
RTN1-201ENST00000267484 TMEM60Q9H2L4 133 aa19■□□□□ 0.63
RTN1-201ENST00000267484 RCCD1A6NED2 376 aa19■□□□□ 0.63
RTN1-201ENST00000267484 B4DLN1 442 aa19■□□□□ 0.63
RTN1-201ENST00000267484 ACTN2P35609 894 aa19■□□□□ 0.63
RTN1-201ENST00000267484 TNNT3P45378 269 aaPredicted RBP19■□□□□ 0.63
RTN1-201ENST00000267484 NAALADL2Q58DX5 795 aa19■□□□□ 0.63
RTN1-201ENST00000267484 STAG2Q8N3U4 1231 aa19■□□□□ 0.63
RTN1-201ENST00000267484 MB21D1Q8N884 522 aa19■□□□□ 0.63
RTN1-201ENST00000267484 LRRC15Q8TF66 581 aa19■□□□□ 0.63
RTN1-201ENST00000267484 RIN2Q8WYP3 895 aaPredicted RBP19■□□□□ 0.63
RTN1-201ENST00000267484 LUC7L2Q9Y383 392 aaKnown RBP19■□□□□ 0.63
RTN1-201ENST00000267484 DUOX1Q9NRD9 1551 aa19■□□□□ 0.63
RTN1-201ENST00000267484 ANKRD65E5RJM6 399 aa19■□□□□ 0.63
RTN1-201ENST00000267484 ZNF185O15231 689 aa19■□□□□ 0.63
RTN1-201ENST00000267484 CAMTA2O94983 1202 aa19■□□□□ 0.63
RTN1-201ENST00000267484 SPAG1Q07617 926 aa19■□□□□ 0.63
RTN1-201ENST00000267484 TAF1P21675 1872 aa19■□□□□ 0.63
RTN1-201ENST00000267484 OR8K1Q8NGG5 319 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 GOLGA5Q8TBA6 731 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 TRIM47Q96LD4 638 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 LACRTQ9GZZ8 138 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 EIF3JO75822 258 aaKnown RBP18.99■□□□□ 0.63
RTN1-201ENST00000267484 CYP27A1Q02318 531 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 BICDL1Q6ZP65 573 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 C4orf32Q8N8J7 132 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 CCDC87Q9NVE4 849 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 TFCP2L1Q9NZI6 479 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 TSPY2A6NKD2 308 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 EXOC5O00471 708 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 DDAH1O94760 285 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 MRPS25P82663 173 aaKnown RBP18.99■□□□□ 0.63
RTN1-201ENST00000267484 PFKFB3Q16875 520 aaPredicted RBP18.99■□□□□ 0.63
RTN1-201ENST00000267484 ADSSL1Q8N142 457 aa18.99■□□□□ 0.63
RTN1-201ENST00000267484 GNL3LQ9NVN8 582 aaKnown RBP18.99■□□□□ 0.63
RTN1-201ENST00000267484 CALM1P0DP23 149 aa18.98■□□□□ 0.63
RTN1-201ENST00000267484 CALM2P0DP24 149 aa18.98■□□□□ 0.63
RTN1-201ENST00000267484 CALM3P0DP25 149 aa18.98■□□□□ 0.63
RTN1-201ENST00000267484 TRAPPC11Q7Z392 1133 aa18.98■□□□□ 0.63
RTN1-201ENST00000267484 FAM84BQ96KN1 310 aaPredicted RBP18.98■□□□□ 0.63
RTN1-201ENST00000267484 BRIP1Q9BX63 1249 aa18.98■□□□□ 0.63
RTN1-201ENST00000267484 MYO1CO00159 1063 aa18.98■□□□□ 0.63
RTN1-201ENST00000267484 HSP90B2PQ58FF3 399 aa18.98■□□□□ 0.63
RTN1-201ENST00000267484 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.98■□□□□ 0.63
RTN1-201ENST00000267484 CCDC24Q8N4L8 307 aa18.98■□□□□ 0.63
RTN1-201ENST00000267484 DCP1AQ9NPI6 582 aaPredicted RBP18.98■□□□□ 0.63
RTN1-201ENST00000267484 DISC1Q9NRI5 854 aa18.98■□□□□ 0.63
RTN1-201ENST00000267484 ZNF804BA4D1E1 1349 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 PRDX5P30044 214 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 MECOMQ03112 1051 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 INF2Q27J81 1249 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 BLIDQ8IZY5 108 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 CPVLQ9H3G5 476 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 PLCH1Q4KWH8 1693 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 MYH13Q9UKX3 1938 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 ERFEQ4G0M1 354 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 KIAA1328Q86T90 577 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 CCDC148Q8NFR7 591 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 FAM204AQ9H8W3 233 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.97■□□□□ 0.63
RTN1-201ENST00000267484 MACROD2A1Z1Q3 448 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 LGALS16A8MUM7 142 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 KCNQ4P56696 695 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 ITPK1Q13572 414 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 LEKR1Q6ZMV7 388 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 HPS3Q969F9 1004 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 RMND1Q9NWS8 449 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 PSD3Q9NYI0 1048 aa18.97■□□□□ 0.63
RTN1-201ENST00000267484 H7C1D1 291 aa18.96■□□□□ 0.63
RTN1-201ENST00000267484 USP17L8P0C7I0 530 aa18.96■□□□□ 0.63
RTN1-201ENST00000267484 ERCC3P19447 782 aa18.96■□□□□ 0.63
RTN1-201ENST00000267484 TUBB2AQ13885 445 aa18.96■□□□□ 0.63
RTN1-201ENST00000267484 TRIM14Q14142 442 aa18.96■□□□□ 0.63
RTN1-201ENST00000267484 CAVIN4Q5BKX8 364 aa18.96■□□□□ 0.63
RTN1-201ENST00000267484 RCSD1Q6JBY9 416 aa18.96■□□□□ 0.63
RTN1-201ENST00000267484 ANKRD18AQ8IVF6 992 aa18.96■□□□□ 0.63
RTN1-201ENST00000267484 SMCR8Q8TEV9 937 aaPredicted RBP18.96■□□□□ 0.63
RTN1-201ENST00000267484 CELF1Q92879 486 aaKnown RBP18.96■□□□□ 0.63
RTN1-201ENST00000267484 PCMTD1Q96MG8 357 aaPredicted RBP18.96■□□□□ 0.63
RTN1-201ENST00000267484 TUBB2BQ9BVA1 445 aa18.96■□□□□ 0.63
RTN1-201ENST00000267484 MYBL2P10244 700 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms