RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ICA1Q05084 483 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 PTPAQ15257 358 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 PPFIBP1Q86W92 1011 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 CYFIP2Q96F07 1278 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 C8orf76Q96K31 380 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 PAGR1Q9BTK6 254 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 METTL22Q9BUU2 404 aaPredicted RBP9.8□□□□□ -0.84
VAPB-201ENST00000265619 PIDD1Q9HB75 910 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 NOD2Q9HC29 1040 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 BSDC1Q9NW68 430 aaPredicted RBP9.8□□□□□ -0.84
VAPB-201ENST00000265619 LMCD1Q9NZU5 365 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 BAIAP2L1Q9UHR4 511 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 TRPC6Q9Y210 931 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 SAR1BQ9Y6B6 198 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 OVOS2A0A0G2JMS6 1433 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 PPP1R37O75864 691 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 HSPA1LP34931 641 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 HERVK_113P62684 666 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 KIF23Q02241 960 aaPredicted RBP9.8□□□□□ -0.84
VAPB-201ENST00000265619 SLC39A14Q15043 492 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 PSMB7Q99436 277 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 TTF2Q9UNY4 1162 aaKnown RBP9.8□□□□□ -0.84
VAPB-201ENST00000265619 HEG1Q9ULI3 1381 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 TARSL2A2RTX5 802 aaKnown RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 ERVV-2B6SEH9 535 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 ELF3P78545 371 aaPredicted RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 TUBB2AQ13885 445 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 TRADDQ15628 312 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 SLC5A9Q2M3M2 681 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 CAPRIN2Q6IMN6 1127 aaKnown RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 RCSD1Q6JBY9 416 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 DHX32Q7L7V1 743 aaKnown RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 NKX2-3Q8TAU0 364 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 SMCR8Q8TEV9 937 aaPredicted RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 PIK3R5Q8WYR1 880 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 JAKMIP2Q96AA8 810 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 TUBB2BQ9BVA1 445 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 LACRTQ9GZZ8 138 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 ADD3Q9UEY8 706 aaKnown RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 ESYT3A0FGR9 886 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 MGRN1O60291 552 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 ABL2P42684 1182 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 DPYDQ12882 1025 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 SYNE3Q6ZMZ3 975 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 USP49Q70CQ1 688 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 MARCH10Q8NA82 808 aaPredicted RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 FAM167BQ9BTA0 163 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 ABHD10Q9NUJ1 306 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 PALLDQ8WX93 1383 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 NCAPD2Q15021 1401 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 KIF4AO95239 1232 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 ANP32DO95626 131 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 TUBBP07437 444 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 ARID4AP29374 1257 aaPredicted RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 HPDP32754 393 aaPredicted RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 SLC8A3P57103 927 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 HLFQ16534 295 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 RESP18Q5W5W9 173 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 TRIM74Q86UV6 250 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 TRIM73Q86UV7 250 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 FAM163AQ96GL9 167 aaPredicted RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 KAZALD1Q96I82 304 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 NLRP3Q96P20 1036 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 NUCKS1Q9H1E3 243 aaKnown RBP9.79□□□□□ -0.84
VAPB-201ENST00000265619 SERTAD1Q9UHV2 236 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 LEMD3Q9Y2U8 911 aa9.79□□□□□ -0.84
VAPB-201ENST00000265619 IPO7O95373 1038 aaKnown RBP9.78□□□□□ -0.84
VAPB-201ENST00000265619 TMOD1P28289 359 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 PLCB4Q15147 1175 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 CCDC121Q6ZUS5 278 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 CAGE1Q8TC20 777 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 ENOX1Q8TC92 643 aaKnown RBP9.78□□□□□ -0.84
VAPB-201ENST00000265619 KCNH3Q9ULD8 1083 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 EPB41P11171 864 aaKnown RBP9.78□□□□□ -0.84
VAPB-201ENST00000265619 PYGBP11216 843 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 ATP5JP18859 108 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 KRT32Q14532 448 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 KDM7AQ6ZMT4 941 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 GPATCH3Q96I76 525 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 MAP3K14Q99558 947 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 LRRC4CQ9HCJ2 640 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 CWC25Q9NXE8 425 aaPredicted RBP9.78□□□□□ -0.84
VAPB-201ENST00000265619 PSMD14O00487 310 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 BUB1BO60566 1050 aaPredicted RBP9.78□□□□□ -0.84
VAPB-201ENST00000265619 NR1D1P20393 614 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 CXCR5P32302 372 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 TUBP50607 506 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 TUBB4BP68371 445 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 DDX46Q7L014 1031 aaKnown RBP9.78□□□□□ -0.84
VAPB-201ENST00000265619 EBF2Q9HAK2 575 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 ARHGEF10LQ9HCE6 1279 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 TRMT112Q9UI30 125 aaKnown RBP9.78□□□□□ -0.84
VAPB-201ENST00000265619 WWC3Q9ULE0 1092 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 PCDHGC5Q9Y5F6 944 aa9.78□□□□□ -0.84
VAPB-201ENST00000265619 MYH10P35580 1976 aa9.77□□□□□ -0.84
VAPB-201ENST00000265619 GOLGA6L7A0A1B0GV03 622 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 E7EWF7 191 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 FAM107AO95990 144 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 MDH1P40925 334 aaKnown RBP9.77□□□□□ -0.85
VAPB-201ENST00000265619 TRAF1Q13077 416 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms