RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 MYO1FO00160 1098 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 FTCDO95954 541 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 VCXQ9H320 206 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 YY1AP1Q9H869 796 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 TBC1D7Q9P0N9 293 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 TNNI2P48788 182 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 STAG1Q8WVM7 1258 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 KLHL29Q96CT2 875 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 TPX2Q9ULW0 747 aaKnown RBP16.67■□□□□ 0.26
CASC3-201ENST00000264645 ZRANB2O95218 330 aaKnown RBP eCLIP16.66■□□□□ 0.263e-7■■■■■ 27.8
CASC3-201ENST00000264645 MYCNP04198 464 aaPredicted RBP16.66■□□□□ 0.26
CASC3-201ENST00000264645 ZNF131P52739 623 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 FMR1Q06787 632 aaKnown RBP eCLIP16.66■□□□□ 0.26
CASC3-201ENST00000264645 INTS9Q9NV88 658 aaKnown RBP16.66■□□□□ 0.26
CASC3-201ENST00000264645 CTDP1Q9Y5B0 961 aaPredicted RBP16.66■□□□□ 0.26
CASC3-201ENST00000264645 CTNNA2P26232 953 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 ELF1P32519 619 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 SESN3P58005 492 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 MYO1EQ12965 1108 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 NELFCDQ8IXH7 590 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 SYCP3Q8IZU3 236 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 PAGE5Q96GU1 130 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 CNOT6LQ96LI5 555 aaKnown RBP16.66■□□□□ 0.26
CASC3-201ENST00000264645 C6orf50Q9HD87 102 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 REREQ9P2R6 1566 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 TBCAO75347 108 aaKnown RBP16.66■□□□□ 0.26
CASC3-201ENST00000264645 PTPN12Q05209 780 aaKnown RBP16.66■□□□□ 0.26
CASC3-201ENST00000264645 PI16Q6UXB8 463 aa16.66■□□□□ 0.26
CASC3-201ENST00000264645 HNRNPLLQ8WVV9 542 aaKnown RBP16.66■□□□□ 0.26
CASC3-201ENST00000264645 PUS3Q9BZE2 481 aaKnown RBP16.66■□□□□ 0.26
CASC3-201ENST00000264645 A1BGP04217 495 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 GJC1P36383 396 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 FOXP1Q9H334 677 aaPredicted RBP16.65■□□□□ 0.26
CASC3-201ENST00000264645 EIF4E1BA6NMX2 242 aaKnown RBP16.65■□□□□ 0.26
CASC3-201ENST00000264645 ADORA1P30542 326 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 ZKSCAN8Q15776 578 aaPredicted RBP16.65■□□□□ 0.26
CASC3-201ENST00000264645 NAP1L3Q99457 506 aaPredicted RBP16.65■□□□□ 0.26
CASC3-201ENST00000264645 CHP1Q99653 195 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 MTUS1Q9ULD2 1270 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 LRRD1A4D1F6 860 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 BACH1O14867 736 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 EIF3HO15372 352 aaKnown RBP eCLIP16.65■□□□□ 0.265e-7■■□□□ 13.1
CASC3-201ENST00000264645 PTPREP23469 700 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 MUM1Q2TAK8 710 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 CABP7Q86V35 215 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 SLC39A2Q9NP94 309 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.65■□□□□ 0.263e-6■■■□□ 15
CASC3-201ENST00000264645 TRIM10Q9UDY6 481 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 ATP8A1Q9Y2Q0 1164 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 SRPRBQ9Y5M8 271 aaKnown RBP16.65■□□□□ 0.26
CASC3-201ENST00000264645 SH3TC1Q8TE82 1336 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 UHRF1BP1LA0JNW5 1464 aa16.65■□□□□ 0.26
CASC3-201ENST00000264645 MMP1P03956 469 aa16.64■□□□□ 0.26
CASC3-201ENST00000264645 FXR1P51114 621 aaKnown RBP eCLIP16.64■□□□□ 0.26
CASC3-201ENST00000264645 VWA3BQ502W6 1294 aa16.64■□□□□ 0.26
CASC3-201ENST00000264645 TCP11X2Q5H9J9 407 aa16.64■□□□□ 0.26
CASC3-201ENST00000264645 SPDL1Q96EA4 605 aa16.64■□□□□ 0.26
CASC3-201ENST00000264645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.64■□□□□ 0.267e-7■■■■■ 52.3
CASC3-201ENST00000264645 HPCAL4Q9UM19 191 aa16.64■□□□□ 0.26
CASC3-201ENST00000264645 ATP6V0A2Q9Y487 856 aa16.64■□□□□ 0.26
CASC3-201ENST00000264645 ZNF185O15231 689 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 CCNT1O60563 726 aaKnown RBP16.64■□□□□ 0.25
CASC3-201ENST00000264645 GCP02774 474 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 EEF1GP26641 437 aaKnown RBP16.64■□□□□ 0.25
CASC3-201ENST00000264645 STX2P32856 288 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 EIF4A3P38919 411 aaKnown RBP16.64■□□□□ 0.25
CASC3-201ENST00000264645 ZBED6P86452 979 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 GSTA5Q7RTV2 222 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 PUS7LQ9H0K6 701 aaKnown RBP16.64■□□□□ 0.25
CASC3-201ENST00000264645 ALDH8A1Q9H2A2 487 aaPredicted RBP16.64■□□□□ 0.25
CASC3-201ENST00000264645 KLHL14Q9P2G3 628 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 GDAQ9Y2T3 454 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 TTC26A0AVF1 554 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
CASC3-201ENST00000264645 ITGA6P23229 1130 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 PPARAQ07869 468 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 IFNL3Q8IZI9 196 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 HOMER3Q9NSC5 361 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 LRRIQ3A6PVS8 624 aaPredicted RBP16.64■□□□□ 0.25
CASC3-201ENST00000264645 TRIM65Q6PJ69 517 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 NLRP14Q86W24 1093 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 SAAL1Q96ER3 474 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 YIPF3Q9GZM5 350 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 VIPAS39Q9H9C1 493 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 PLCB1Q9NQ66 1216 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 PLAAQ9Y263 795 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 IKBKGQ9Y6K9 419 aa16.64■□□□□ 0.25
CASC3-201ENST00000264645 HMGB1P1B2RPK0 211 aaPredicted RBP16.63■□□□□ 0.25
CASC3-201ENST00000264645 POLR2FP61218 127 aaKnown RBP16.63■□□□□ 0.25
CASC3-201ENST00000264645 TSGA10IPQ3SY00 556 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 EPHA10Q5JZY3 1008 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 THOC1Q96FV9 657 aaKnown RBP16.63■□□□□ 0.25
CASC3-201ENST00000264645 RAB17Q9H0T7 212 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 DHX9Q08211 1270 aaKnown RBP16.63■□□□□ 0.25
CASC3-201ENST00000264645 MCUR1Q96AQ8 359 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 SMC6Q96SB8 1091 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms