RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 GRAPQ13588 217 aa18.58■□□□□ 0.57
PHRF1-201ENST00000264555 CCDC26Q8TAB7 109 aa18.58■□□□□ 0.57
PHRF1-201ENST00000264555 GRAPLQ8TC17 118 aaPredicted RBP18.58■□□□□ 0.57
PHRF1-201ENST00000264555 AIFM3Q96NN9 605 aa18.58■□□□□ 0.57
PHRF1-201ENST00000264555 FERMT1Q9BQL6 677 aa18.58■□□□□ 0.57
PHRF1-201ENST00000264555 STMN4Q9H169 189 aaPredicted RBP18.58■□□□□ 0.57
PHRF1-201ENST00000264555 MYCLP12524 364 aaPredicted RBP18.58■□□□□ 0.56
PHRF1-201ENST00000264555 LONRF3Q496Y0 759 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 WDR44Q5JSH3 913 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 RRAGAQ7L523 313 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 TBC1D10CQ8IV04 446 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 CPXCR1Q8N123 301 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 BCL2L12Q9HB09 334 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 RPS6KA4O75676 772 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 CNKSR1Q969H4 720 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 KIFC2Q96AC6 838 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 IFT74Q96LB3 600 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 CEMIPQ8WUJ3 1361 aa18.58■□□□□ 0.56
PHRF1-201ENST00000264555 SLFN13Q68D06 897 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 SRP68Q9UHB9 627 aaKnown RBP18.57■□□□□ 0.56
PHRF1-201ENST00000264555 ATP6V0A2Q9Y487 856 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 C8orf74Q6P047 294 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 FBXO11Q86XK2 927 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 FAM212AQ96EL1 285 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 TSKSQ9UJT2 592 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 ERCC3P19447 782 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 PRR16Q569H4 304 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 MB21D2Q8IYB1 491 aaPredicted RBP18.57■□□□□ 0.56
PHRF1-201ENST00000264555 IFIH1Q9BYX4 1025 aaKnown RBP18.57■□□□□ 0.56
PHRF1-201ENST00000264555 hCG_1984214I3L0E3 225 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 EXOC3O60645 756 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 CFAP58Q5T655 872 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 ZNF713Q8N859 430 aaPredicted RBP18.57■□□□□ 0.56
PHRF1-201ENST00000264555 CEP83Q9Y592 693 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 CYP2D7A0A087X1C5 515 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 DDX39AO00148 427 aaKnown RBP18.57■□□□□ 0.56
PHRF1-201ENST00000264555 GAS7O60861 476 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 NBPF11Q86T75 865 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 TPH2Q8IWU9 490 aa18.57■□□□□ 0.56
PHRF1-201ENST00000264555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.56■□□□□ 0.56
PHRF1-201ENST00000264555 FLOT1O75955 427 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 MSL1Q68DK7 614 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 TYW1BQ6NUM6 668 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 TTLL1O95922 423 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 USP17L8P0C7I0 530 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 ALX1Q15699 326 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 SEL1L2Q5TEA6 688 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 CCDC50Q8IVM0 306 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 DESI2Q9BSY9 194 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 MTA3Q9BTC8 594 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 QTRT2Q9H974 415 aaKnown RBP18.56■□□□□ 0.56
PHRF1-201ENST00000264555 MTRF1LQ9UGC7 380 aaKnown RBP18.56■□□□□ 0.56
PHRF1-201ENST00000264555 PLA2G12BQ9BX93 195 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 MAN1B1Q9UKM7 699 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 PCDHA1Q9Y5I3 950 aa18.56■□□□□ 0.56
PHRF1-201ENST00000264555 BIRC3Q13489 604 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 ARFGAP2Q8N6H7 521 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 TRERF1Q96PN7 1200 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 STK36Q9NRP7 1315 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 NCBP1Q09161 790 aaKnown RBP18.55■□□□□ 0.56
PHRF1-201ENST00000264555 GSTA5Q7RTV2 222 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 PANK4Q9NVE7 773 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 PCDHB6Q9Y5E3 794 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 IKBKGQ9Y6K9 419 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 FOSP01100 380 aaPredicted RBP18.55■□□□□ 0.56
PHRF1-201ENST00000264555 MSANTD4Q8NCY6 345 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 GJC1P36383 396 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 COPB1P53618 953 aaKnown RBP18.55■□□□□ 0.56
PHRF1-201ENST00000264555 NSMFQ6X4W1 530 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 MRPL11Q9Y3B7 192 aaKnown RBP18.55■□□□□ 0.56
PHRF1-201ENST00000264555 MROH2AA6NES4 1674 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 PPLO60437 1756 aa18.55■□□□□ 0.56
PHRF1-201ENST00000264555 KRT5P13647 590 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 DGKHQ86XP1 1220 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 KIAA1524Q8TCG1 905 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 RASGRP4Q8TDF6 673 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 NEDD4P46934 1319 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 MYL1P05976 194 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 MAEAQ7L5Y9 396 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 GPR161Q8N6U8 529 aaKnown RBP18.54■□□□□ 0.56
PHRF1-201ENST00000264555 CACTINQ8WUQ7 758 aaKnown RBP18.54■□□□□ 0.56
PHRF1-201ENST00000264555 RPGRIP1Q96KN7 1286 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 NARFQ9UHQ1 456 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 MINPP1Q9UNW1 487 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 SPATA31D1Q6ZQQ2 1576 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 ATP2A1O14983 1001 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 ABCB5Q2M3G0 1257 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 CYB5R4Q7L1T6 521 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 ENOX1Q8TC92 643 aaKnown RBP18.54■□□□□ 0.56
PHRF1-201ENST00000264555 NLRC4Q9NPP4 1024 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 COL15A1P39059 1388 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 POLR2MP0CAP2 368 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 RCAN1P53805 252 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 TNFAIP1Q13829 316 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 WHAMMP3Q1A5X7 153 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 SLC39A2Q9NP94 309 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 SERPINB13Q9UIV8 391 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 A0A087WWV3 80 aa18.54■□□□□ 0.56
PHRF1-201ENST00000264555 STRN3Q13033 797 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms