RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 MOB2Q70IA6 237 aa26.16■■□□□ 1.78
UFD1-201ENST00000263202 BARHL2Q9NY43 387 aa26.16■■□□□ 1.78
UFD1-201ENST00000263202 CSADQ9Y600 493 aa26.16■■□□□ 1.78
UFD1-201ENST00000263202 TRAF5O00463 557 aa26.15■■□□□ 1.78
UFD1-201ENST00000263202 DNM1Q05193 864 aaKnown RBP26.15■■□□□ 1.78
UFD1-201ENST00000263202 HEATR3Q7Z4Q2 680 aa26.15■■□□□ 1.78
UFD1-201ENST00000263202 LPAR1Q92633 364 aa26.15■■□□□ 1.78
UFD1-201ENST00000263202 PTPRFP10586 1907 aa26.14■■□□□ 1.78
UFD1-201ENST00000263202 STXBP3O00186 592 aa26.14■■□□□ 1.78
UFD1-201ENST00000263202 U2AF2P26368 475 aaKnown RBP eCLIP26.14■■□□□ 1.788e-9■■■■■ 33.2
UFD1-201ENST00000263202 BACE1P56817 501 aa26.14■■□□□ 1.78
UFD1-201ENST00000263202 TTLL12Q14166 644 aaPredicted RBP26.14■■□□□ 1.78
UFD1-201ENST00000263202 SAFBQ15424 915 aaKnown RBP eCLIP26.14■■□□□ 1.78
UFD1-201ENST00000263202 TYW1BQ6NUM6 668 aa26.14■■□□□ 1.78
UFD1-201ENST00000263202 DIS3L2Q8IYB7 885 aaKnown RBP26.14■■□□□ 1.78
UFD1-201ENST00000263202 PNMA6FA0A0J9YX94 578 aa26.14■■□□□ 1.77
UFD1-201ENST00000263202 STAT2P52630 851 aa26.14■■□□□ 1.77
UFD1-201ENST00000263202 USP14P54578 494 aa26.14■■□□□ 1.77
UFD1-201ENST00000263202 FMR1Q06787 632 aaKnown RBP eCLIP26.14■■□□□ 1.772e-13■■■■■ 47.4
UFD1-201ENST00000263202 IKQ13123 557 aaPredicted RBP26.14■■□□□ 1.77
UFD1-201ENST00000263202 DGKZQ13574 1117 aa26.14■■□□□ 1.77
UFD1-201ENST00000263202 SYDE2Q5VT97 1194 aa26.14■■□□□ 1.77
UFD1-201ENST00000263202 BRAPQ7Z569 592 aa26.14■■□□□ 1.77
UFD1-201ENST00000263202 ANKRD13AQ8IZ07 590 aa26.14■■□□□ 1.77
UFD1-201ENST00000263202 EMILIN3Q9NT22 766 aa26.14■■□□□ 1.77
UFD1-201ENST00000263202 AFG3L2Q9Y4W6 797 aa26.14■■□□□ 1.77
UFD1-201ENST00000263202 BTBD18B2RXH4 712 aa26.13■■□□□ 1.77
UFD1-201ENST00000263202 ZBTB5O15062 677 aa26.13■■□□□ 1.77
UFD1-201ENST00000263202 NPY5RQ15761 445 aa26.13■■□□□ 1.77
UFD1-201ENST00000263202 TRIM75PA6NK02 468 aa26.12■■□□□ 1.77
UFD1-201ENST00000263202 WDR46O15213 610 aaKnown RBP26.12■■□□□ 1.77
UFD1-201ENST00000263202 PLA2G6O60733 806 aa26.12■■□□□ 1.77
UFD1-201ENST00000263202 NLRP5P59047 1200 aa26.12■■□□□ 1.77
UFD1-201ENST00000263202 ARMC9Q7Z3E5 817 aa26.12■■□□□ 1.77
UFD1-201ENST00000263202 FAM177A1Q8N128 213 aaPredicted RBP26.12■■□□□ 1.77
UFD1-201ENST00000263202 FOXP1Q9H334 677 aaPredicted RBP26.12■■□□□ 1.77
UFD1-201ENST00000263202 CNPY2Q9Y2B0 182 aa26.12■■□□□ 1.77
UFD1-201ENST00000263202 PARP14Q460N5 1801 aa26.12■■□□□ 1.77
UFD1-201ENST00000263202 hCG_1984214I3L0E3 225 aa26.11■■□□□ 1.77
UFD1-201ENST00000263202 GNL2Q13823 731 aaKnown RBP26.11■■□□□ 1.77
UFD1-201ENST00000263202 ZNF713Q8N859 430 aaPredicted RBP26.11■■□□□ 1.77
UFD1-201ENST00000263202 OXER1Q8TDS5 423 aa26.11■■□□□ 1.77
UFD1-201ENST00000263202 CHURC1Q8WUH1 139 aa26.11■■□□□ 1.77
UFD1-201ENST00000263202 PRR12Q9ULL5 1215 aa26.11■■□□□ 1.77
UFD1-201ENST00000263202 C19orf81C9J6K1 198 aa26.11■■□□□ 1.77
UFD1-201ENST00000263202 PPP1R11O60927 126 aaPredicted RBP26.11■■□□□ 1.77
UFD1-201ENST00000263202 KRT2P35908 639 aa26.11■■□□□ 1.77
UFD1-201ENST00000263202 CDC37Q16543 378 aaPredicted RBP26.11■■□□□ 1.77
UFD1-201ENST00000263202 CCDC148Q8NFR7 591 aa26.11■■□□□ 1.77
UFD1-201ENST00000263202 CLMNQ96JQ2 1002 aa26.11■■□□□ 1.77
UFD1-201ENST00000263202 FEM1BQ9UK73 627 aa26.11■■□□□ 1.77
UFD1-201ENST00000263202 QRICH1Q2TAL8 776 aa26.1■■□□□ 1.77
UFD1-201ENST00000263202 FAM160B2Q86V87 743 aa26.1■■□□□ 1.77
UFD1-201ENST00000263202 C12orf42Q96LP6 360 aa26.1■■□□□ 1.77
UFD1-201ENST00000263202 ELP3Q9H9T3 547 aa26.1■■□□□ 1.77
UFD1-201ENST00000263202 DDX11L8A8MPP1 907 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 GOLGA6L22H0YM25 854 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 VCAM1P19320 739 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 NCLP19338 710 aaKnown RBP26.09■■□□□ 1.77
UFD1-201ENST00000263202 CALML3P27482 149 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 NAPAP54920 295 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 KRT85P78386 507 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 NR5A1Q13285 461 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 NOSTRINQ8IVI9 506 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 CCDC12Q8WUD4 166 aaPredicted RBP26.09■■□□□ 1.77
UFD1-201ENST00000263202 CNKSR2Q8WXI2 1034 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 COA7Q96BR5 231 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 ZNF408Q9H9D4 720 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 BRMS1Q9HCU9 246 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.09■■□□□ 1.77
UFD1-201ENST00000263202 HMGCS2P54868 508 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 LDLRAD1Q5T700 205 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 MYSM1Q5VVJ2 828 aa26.09■■□□□ 1.77
UFD1-201ENST00000263202 SNAP25P60880 206 aa26.08■■□□□ 1.77
UFD1-201ENST00000263202 ZMYND12Q9H0C1 365 aa26.08■■□□□ 1.77
UFD1-201ENST00000263202 GDPD2Q9HCC8 539 aa26.08■■□□□ 1.77
UFD1-201ENST00000263202 FBXO28Q9NVF7 368 aa26.08■■□□□ 1.77
UFD1-201ENST00000263202 TFIP11Q9UBB9 837 aaKnown RBP26.08■■□□□ 1.77
UFD1-201ENST00000263202 ADAMTS3O15072 1205 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 PPATQ06203 517 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 SH3D19Q5HYK7 790 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 GALNT17Q6IS24 598 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 ERO1BQ86YB8 467 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 DAGLBQ8NCG7 672 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 RBM46Q8TBY0 533 aaKnown RBP26.07■■□□□ 1.76
UFD1-201ENST00000263202 TNFRSF25Q93038 417 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 KIFC2Q96AC6 838 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 PCDHA4Q9UN74 947 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 TRPM7Q96QT4 1865 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 ATL3Q6DD88 541 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 BLIDQ8IZY5 108 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 ZNF396Q96N95 335 aaPredicted RBP26.07■■□□□ 1.76
UFD1-201ENST00000263202 RPAP3Q9H6T3 665 aaPredicted RBP26.07■■□□□ 1.76
UFD1-201ENST00000263202 LOC285556D6RIA3 1793 aa26.07■■□□□ 1.76
UFD1-201ENST00000263202 RLFQ13129 1914 aa26.06■■□□□ 1.76
UFD1-201ENST00000263202 ESYT2A0FGR8 921 aa26.06■■□□□ 1.76
UFD1-201ENST00000263202 SPDYE5A6NIY4 337 aa26.06■■□□□ 1.76
UFD1-201ENST00000263202 PPP1R18Q6NYC8 613 aa26.06■■□□□ 1.76
UFD1-201ENST00000263202 SMCO2A6NFE2 343 aa26.05■■□□□ 1.76
UFD1-201ENST00000263202 FIBPO43427 364 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms