RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 AKAP11Q9UKA4 1901 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 TRIM49BA6NDI0 452 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 ADAMTS3O15072 1205 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 NCAPH2Q6IBW4 605 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 NELFBQ8WX92 580 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 GSDMAQ96QA5 445 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 PNKPQ96T60 521 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 TM4SF1P30408 202 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 SEC23AQ15436 765 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 APTXQ7Z2E3 356 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 GPKOWQ92917 476 aaPredicted RBP eCLIP16.32■□□□□ 0.28e-8■■■■■ 30.4
SFSWAP-201ENST00000261674 CAPZA3Q96KX2 299 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 SBF2Q86WG5 1849 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 H3BQF6 201 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 N4BP1O75113 896 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 PHF20Q9BVI0 1012 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 ABCB6Q9NP58 842 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 ADAM21Q9UKJ8 722 aa16.32■□□□□ 0.2
SFSWAP-201ENST00000261674 NHSQ6T4R5 1651 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 TSR1Q2NL82 804 aaKnown RBP16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 NLGN1Q8N2Q7 840 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 GNL3LQ9NVN8 582 aaKnown RBP16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 PODXL2Q9NZ53 605 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 NUP188Q5SRE5 1749 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 SPEF2Q9C093 1822 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 CTAGE15A4D2H0 777 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 TSPY2A6NKD2 308 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 PP2D1A8MPX8 630 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 CTAGE8P0CG41 777 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 CYP2D6P10635 497 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 ERVK-24P63145 666 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 PAK1Q13153 545 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 CTAGE6Q86UF2 777 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 CTAGE4Q8IX94 777 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 CEP112Q8N8E3 955 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 FERMT2Q96AC1 680 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 RTL9Q8NET4 1388 aa16.31■□□□□ 0.2
SFSWAP-201ENST00000261674 COPB1P53618 953 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 XDHP47989 1333 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 CCDC151A5D8V7 595 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 VGLL3A8MV65 326 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 KCNJ18B7U540 433 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 ERCC3P19447 782 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 STAT6P42226 847 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 KCNJ12Q14500 433 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 SPATA20Q8TB22 786 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 NAPGQ99747 312 aaPredicted RBP16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 HDAC6Q9UBN7 1215 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 PRPF3O43395 683 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 ZMYND10O75800 440 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 ADRA2BP18089 450 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 CAVIN4Q5BKX8 364 aa16.3■□□□□ 0.2
SFSWAP-201ENST00000261674 F8W031 263 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 TNNT3P45378 269 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 IRX5P78411 483 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 TROAPQ12815 778 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 NOA1Q8NC60 698 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 ANKZF1Q9H8Y5 726 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 SRGAP2O75044 1071 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 ERLIN1O75477 346 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 PRCPP42785 496 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 VSNL1P62760 191 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 SF3B3Q15393 1217 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 ZSCAN26Q16670 478 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 DOK7Q18PE1 504 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 CDKAL1Q5VV42 579 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 ABHD10Q9NUJ1 306 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 C4AP0C0L4 1744 aa16.29■□□□□ 0.2
SFSWAP-201ENST00000261674 HSP90B2PQ58FF3 399 aa16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 RASGRP2Q7LDG7 609 aa16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 TMTC1Q8IUR5 882 aa16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 ELOA2Q8IYF1 753 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 NAA15Q9BXJ9 866 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 UFL1O94874 794 aa16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 TXLNBQ8N3L3 684 aa16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 BBXQ8WY36 941 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 MTRQ99707 1265 aa16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 FAM193AP78312 1265 aa16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 GPSM2P81274 684 aa16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 CYP26C1Q6V0L0 522 aa16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 TTF2Q9UNY4 1162 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-201ENST00000261674 RPN1P04843 607 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 CAPN2P17655 700 aa16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 BRD3Q15059 726 aa16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 CTR9Q6PD62 1173 aa16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 HDXQ7Z353 690 aa16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 KIAA1328Q86T90 577 aa16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 C2CD5Q86YS7 1000 aa16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 BSDC1Q9NW68 430 aaPredicted RBP16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 FAN1Q9Y2M0 1017 aa16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 EPN1Q9Y6I3 576 aaPredicted RBP16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 MYH7P12883 1935 aa16.27■□□□□ 0.2
SFSWAP-201ENST00000261674 ATP8B1O43520 1251 aa16.27■□□□□ 0.19
SFSWAP-201ENST00000261674 SCG2P13521 617 aa16.27■□□□□ 0.19
SFSWAP-201ENST00000261674 UBA7P41226 1012 aa16.27■□□□□ 0.19
SFSWAP-201ENST00000261674 FUT2Q10981 343 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms