RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 MGARPQ8TDB4 240 aa11.27□□□□□ -0.6
PALB2-201ENST00000261584 LPIN2Q92539 896 aa11.27□□□□□ -0.6
PALB2-201ENST00000261584 GJA10Q969M2 543 aa11.27□□□□□ -0.6
PALB2-201ENST00000261584 EXOC4Q96A65 974 aa11.27□□□□□ -0.6
PALB2-201ENST00000261584 JPH2Q9BR39 696 aaPredicted RBP11.27□□□□□ -0.6
PALB2-201ENST00000261584 CAPS2Q9BXY5 557 aa11.27□□□□□ -0.6
PALB2-201ENST00000261584 BCS1LQ9Y276 419 aa11.27□□□□□ -0.6
PALB2-201ENST00000261584 KRT13P13646 458 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 CPLX4Q7Z7G2 160 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 PNMA8AQ86V59 439 aaPredicted RBP11.27□□□□□ -0.61
PALB2-201ENST00000261584 MS4A14Q96JA4 679 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 KRT12Q99456 494 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 ABHD10Q9NUJ1 306 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 KNDC1Q76NI1 1749 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 TSPOAP1O95153 1857 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 RDH13Q8NBN7 331 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 SLC44A5Q8NCS7 719 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 ZSCAN10Q96SZ4 725 aaPredicted RBP11.27□□□□□ -0.61
PALB2-201ENST00000261584 TACO1Q9BSH4 297 aaKnown RBP11.27□□□□□ -0.61
PALB2-201ENST00000261584 PKD2L1Q9P0L9 805 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 HYOU1Q9Y4L1 999 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 OVOS2A0A0J9YW53 1432 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 OVOS2Q6IE36 1432 aa11.27□□□□□ -0.61
PALB2-201ENST00000261584 GYPCP04921 128 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 PLEKP08567 350 aaPredicted RBP11.26□□□□□ -0.61
PALB2-201ENST00000261584 GJC1P36383 396 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 CCDC152Q4G0S7 254 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 FAM182BQ5T319 152 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 ZNF526Q8TF50 670 aaPredicted RBP11.26□□□□□ -0.61
PALB2-201ENST00000261584 PPM1EQ8WY54 764 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 TBC1D31Q96DN5 1066 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 EPB41L5Q9HCM4 733 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 BTG4Q9NY30 223 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 FRMPD2Q68DX3 1309 aaPredicted RBP11.26□□□□□ -0.61
PALB2-201ENST00000261584 EXOC5O00471 708 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 ABCB4P21439 1286 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 ARID4AP29374 1257 aaPredicted RBP11.26□□□□□ -0.61
PALB2-201ENST00000261584 KIF5BP33176 963 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 ACTN3Q08043 901 aaPredicted RBP11.26□□□□□ -0.61
PALB2-201ENST00000261584 SRLQ86TD4 932 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 KCNB2Q92953 911 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 FBXO2Q9UK22 296 aaPredicted RBP11.26□□□□□ -0.61
PALB2-201ENST00000261584 NFU1Q9UMS0 254 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 FRMPD1Q5SYB0 1578 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 IFT172Q9UG01 1749 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 PIK3C2BO00750 1634 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 USP17L3A6NCW0 530 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 USP17L4A6NCW7 530 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 IFNAR1P17181 557 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 TOB1P50616 345 aaPredicted RBP11.26□□□□□ -0.61
PALB2-201ENST00000261584 USP17L1Q7RTZ2 530 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 CNOT6LQ96LI5 555 aaKnown RBP11.26□□□□□ -0.61
PALB2-201ENST00000261584 SELENOOQ9BVL4 669 aa11.26□□□□□ -0.61
PALB2-201ENST00000261584 CRNKL1Q9BZJ0 848 aaKnown RBP11.26□□□□□ -0.61
PALB2-201ENST00000261584 ZNF76P36508 570 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 WHAMMP3Q1A5X7 153 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 CCDC155Q8N6L0 562 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 SRPRBQ9Y5M8 271 aaKnown RBP11.25□□□□□ -0.61
PALB2-201ENST00000261584 KCNK3O14649 394 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 KRT14P02533 472 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 USP17L8P0C7I0 530 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 VEGFAP15692 232 aaPredicted RBP11.25□□□□□ -0.61
PALB2-201ENST00000261584 MCM3P25205 808 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 IFNAR2P48551 515 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 EVX2Q03828 476 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 UBE4AQ14139 1066 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 CABP7Q86V35 215 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
PALB2-201ENST00000261584 FAM71BQ8TC56 605 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 TGFBRAP1Q8WUH2 860 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 TSG101Q99816 390 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 AP1M1Q9BXS5 423 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 C6orf229H3BNL8 230 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 FCER1AP12319 257 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 ERVK-24P63145 666 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 PTPAQ15257 358 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 RRP36Q96EU6 259 aaKnown RBP11.25□□□□□ -0.61
PALB2-201ENST00000261584 NHEJ1Q9H9Q4 299 aaPredicted RBP11.25□□□□□ -0.61
PALB2-201ENST00000261584 EPB41L4AQ9HCS5 686 aaPredicted RBP11.25□□□□□ -0.61
PALB2-201ENST00000261584 RIMS1Q86UR5 1692 aaKnown RBP11.25□□□□□ -0.61
PALB2-201ENST00000261584 PDE8AO60658 829 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 EIF4A3P38919 411 aaKnown RBP11.25□□□□□ -0.61
PALB2-201ENST00000261584 POLR2FP61218 127 aaKnown RBP11.25□□□□□ -0.61
PALB2-201ENST00000261584 GBP6Q6ZN66 633 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 EHBP1Q8NDI1 1231 aa11.25□□□□□ -0.61
PALB2-201ENST00000261584 LUC7LQ9NQ29 371 aaKnown RBP11.25□□□□□ -0.61
PALB2-201ENST00000261584 HECW2Q9P2P5 1572 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 A0A087X0B3 334 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 OPA1O60313 960 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 NEFHP12036 1026 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 GBP2P32456 591 aaPredicted RBP11.24□□□□□ -0.61
PALB2-201ENST00000261584 NAA25Q14CX7 972 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 TCP11X2Q5H9J9 407 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 CCDC121Q6ZUS5 278 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 IGDCC4Q8TDY8 1250 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 LRRC1Q9BTT6 524 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 BAIAP2L1Q9UHR4 511 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 TUBE1Q9UJT0 475 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
PALB2-201ENST00000261584 RNF225M0QZC1 329 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms