RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 CCDC155Q8N6L0 562 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 ZNF496Q96IT1 587 aaPredicted RBP14.32□□□□□ -0.12
TMEM260-201ENST00000261556 TRIM31Q9BZY9 425 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 CHMP2BQ9UQN3 213 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 ATP7AQ04656 1500 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 COBLO75128 1261 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 RAB27AP51159 221 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 RBL2Q08999 1139 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 MIGA1Q8NAN2 632 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 CCHCR1Q8TD31 782 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 ESR2Q92731 530 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 GMNCA6NCL1 334 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 ZBTB43O43298 467 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 UBA7P41226 1012 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 CYP26C1Q6V0L0 522 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 TMTC1Q8IUR5 882 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 A1CFQ9NQ94 594 aaKnown RBP14.32□□□□□ -0.12
TMEM260-201ENST00000261556 MAGI3Q5TCQ9 1506 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 UBXN1Q04323 297 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.31□□□□□ -0.12
TMEM260-201ENST00000261556 Q4G0T1 1027 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 NANOGNBQ7Z5D8 188 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 HAUS1Q96CS2 278 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 DYDC2Q96IM9 177 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 ELAC2Q9BQ52 826 aaKnown RBP14.31□□□□□ -0.12
TMEM260-201ENST00000261556 TRIM7Q9C029 511 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 ADGRL2O95490 1459 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 ESYT3A0FGR9 886 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 KRT83P78385 493 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 PICALMQ13492 652 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 INTS8Q75QN2 995 aaKnown RBP14.31□□□□□ -0.12
TMEM260-201ENST00000261556 ZC3H18Q86VM9 953 aaKnown RBP14.31□□□□□ -0.12
TMEM260-201ENST00000261556 KIF2BQ8N4N8 673 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 NYXQ9GZU5 481 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 KCNK9Q9NPC2 374 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 C15orf41Q9Y2V0 281 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 EDC4Q6P2E9 1401 aaKnown RBP14.31□□□□□ -0.12
TMEM260-201ENST00000261556 NMIQ13287 307 aaPredicted RBP14.31□□□□□ -0.12
TMEM260-201ENST00000261556 CEP70Q8NHQ1 597 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 CYFIP2Q96F07 1278 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 C2CD2Q9Y426 696 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 SBNO2Q9Y2G9 1366 aa14.31□□□□□ -0.12
TMEM260-201ENST00000261556 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.3□□□□□ -0.12
TMEM260-201ENST00000261556 SASH1O94885 1247 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 PFKFB1P16118 471 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 SERPINB4P48594 390 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 TMEM266Q2M3C6 531 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 NBPF14Q5TI25 921 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 VIPAS39Q9H9C1 493 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 SH3TC1Q8TE82 1336 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 PHF20L1A8MW92 1017 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 SYF2O95926 243 aaKnown RBP14.3□□□□□ -0.12
TMEM260-201ENST00000261556 EPHB4P54760 987 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 ROR2Q01974 943 aaKnown RBP14.3□□□□□ -0.12
TMEM260-201ENST00000261556 MYCBPAPQ8TBZ2 947 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 MMS19Q96T76 1030 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 CCNL1Q9UK58 526 aaPredicted RBP14.3□□□□□ -0.12
TMEM260-201ENST00000261556 RIMBP2O15034 1052 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 TSPY3P0CV98 308 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 TSPY8P0CW00 308 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 ATP2A2P16615 1042 aaKnown RBP14.3□□□□□ -0.12
TMEM260-201ENST00000261556 RAD23BP54727 409 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 KBTBD12Q3ZCT8 623 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 RUFY4Q6ZNE9 571 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 CACNA2D4Q7Z3S7 1137 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 UHMK1Q8TAS1 419 aaKnown RBP14.3□□□□□ -0.12
TMEM260-201ENST00000261556 SLC39A2Q9NP94 309 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 STIM2Q9P246 746 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 YEATS2Q9ULM3 1422 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 NFU1Q9UMS0 254 aa14.3□□□□□ -0.12
TMEM260-201ENST00000261556 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.3□□□□□ -0.12
TMEM260-201ENST00000261556 ANKRD62A6NC57 917 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 ATP6V1G2O95670 118 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 SCTRP47872 440 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 GSTO1P78417 241 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 GRIK3Q13003 919 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 TRAPPC3LQ5T215 181 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 MAIP1Q8WWC4 291 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 RRP36Q96EU6 259 aaKnown RBP14.29□□□□□ -0.12
TMEM260-201ENST00000261556 TAOK3Q9H2K8 898 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 EPB41L5Q9HCM4 733 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 TCP11L1Q9NUJ3 509 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 NOVA2Q9UNW9 492 aaKnown RBP14.29□□□□□ -0.12
TMEM260-201ENST00000261556 ADGRG1Q9Y653 693 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 RPS6KL1Q9Y6S9 549 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 AHCYL1O43865 530 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 RTN3O95197 1032 aaPredicted RBP14.29□□□□□ -0.12
TMEM260-201ENST00000261556 EPAS1Q99814 870 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 EIF2AK4Q9P2K8 1649 aaKnown RBP14.29□□□□□ -0.12
TMEM260-201ENST00000261556 PNMA6EA0A0J9YXQ4 647 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 TMOD1P28289 359 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 CCDC24Q8N4L8 307 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 RPGRIP1Q96KN7 1286 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 FAM227BQ96M60 508 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 CCDC42Q96M95 316 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 MAGI2Q86UL8 1455 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 TXNDC9O14530 226 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 CFAP157Q5JU67 520 aa14.29□□□□□ -0.12
TMEM260-201ENST00000261556 STMN2Q93045 179 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms