RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 NAPAP54920 295 aa25.63■■□□□ 1.69
SIX3-201ENST00000260653 GPATCH4Q5T3I0 446 aaKnown RBP25.63■■□□□ 1.69
SIX3-201ENST00000260653 KRI1Q8N9T8 703 aaKnown RBP25.63■■□□□ 1.69
SIX3-201ENST00000260653 NOL7Q9UMY1 257 aaKnown RBP25.63■■□□□ 1.69
SIX3-201ENST00000260653 MRVI1Q9Y6F6 885 aa25.63■■□□□ 1.69
SIX3-201ENST00000260653 FHDC1Q9C0D6 1143 aaPredicted RBP25.62■■□□□ 1.69
SIX3-201ENST00000260653 M0R2N6 131 aa25.62■■□□□ 1.69
SIX3-201ENST00000260653 CUTAO60888 179 aa25.62■■□□□ 1.69
SIX3-201ENST00000260653 SLC16A2P36021 539 aa25.62■■□□□ 1.69
SIX3-201ENST00000260653 MIGA2Q7L4E1 593 aa25.62■■□□□ 1.69
SIX3-201ENST00000260653 SAMD7Q7Z3H4 446 aa25.62■■□□□ 1.69
SIX3-201ENST00000260653 ADGRF4Q8IZF3 695 aa25.62■■□□□ 1.69
SIX3-201ENST00000260653 PGAP2Q9UHJ9 254 aa25.62■■□□□ 1.69
SIX3-201ENST00000260653 FBXO2Q9UK22 296 aaPredicted RBP25.62■■□□□ 1.69
SIX3-201ENST00000260653 CEP131Q9UPN4 1083 aa25.62■■□□□ 1.69
SIX3-201ENST00000260653 GRIN1Q05586 938 aa25.61■■□□□ 1.69
SIX3-201ENST00000260653 DAGLBQ8NCG7 672 aa25.61■■□□□ 1.69
SIX3-201ENST00000260653 TTC38Q5R3I4 469 aa25.61■■□□□ 1.69
SIX3-201ENST00000260653 DPF2Q92785 391 aa25.61■■□□□ 1.69
SIX3-201ENST00000260653 JMJD4Q9H9V9 463 aa25.61■■□□□ 1.69
SIX3-201ENST00000260653 CNOT7Q9UIV1 285 aaKnown RBP25.61■■□□□ 1.69
SIX3-201ENST00000260653 CCDC192P0DO97 292 aa25.6■■□□□ 1.69
SIX3-201ENST00000260653 PTPREP23469 700 aa25.6■■□□□ 1.69
SIX3-201ENST00000260653 SLC1A4P43007 532 aa25.6■■□□□ 1.69
SIX3-201ENST00000260653 TBC1D10BQ4KMP7 808 aaPredicted RBP25.6■■□□□ 1.69
SIX3-201ENST00000260653 SLFN13Q68D06 897 aa25.6■■□□□ 1.69
SIX3-201ENST00000260653 ZMYND12Q9H0C1 365 aa25.6■■□□□ 1.69
SIX3-201ENST00000260653 MMP14P50281 582 aa25.6■■□□□ 1.69
SIX3-201ENST00000260653 RESP18Q5W5W9 173 aa25.6■■□□□ 1.69
SIX3-201ENST00000260653 GALNT17Q6IS24 598 aa25.6■■□□□ 1.69
SIX3-201ENST00000260653 PCDHA6Q9UN73 950 aa25.6■■□□□ 1.69
SIX3-201ENST00000260653 PCDHA8Q9Y5H6 950 aa25.6■■□□□ 1.69
SIX3-201ENST00000260653 ASTN2O75129 1339 aaPredicted RBP25.59■■□□□ 1.69
SIX3-201ENST00000260653 ZNF174Q15697 407 aa25.59■■□□□ 1.69
SIX3-201ENST00000260653 ARHGAP27Q6ZUM4 889 aa25.59■■□□□ 1.69
SIX3-201ENST00000260653 CCDC12Q8WUD4 166 aaPredicted RBP25.59■■□□□ 1.69
SIX3-201ENST00000260653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.59■■□□□ 1.69
SIX3-201ENST00000260653 TYRO3Q06418 890 aa25.59■■□□□ 1.69
SIX3-201ENST00000260653 RASA3Q14644 834 aa25.59■■□□□ 1.69
SIX3-201ENST00000260653 SPECC1Q5M775 1068 aa25.59■■□□□ 1.69
SIX3-201ENST00000260653 FAM177A1Q8N128 213 aaPredicted RBP25.59■■□□□ 1.69
SIX3-201ENST00000260653 DCAF4Q8WV16 495 aa25.59■■□□□ 1.69
SIX3-201ENST00000260653 A0A1W2PRG0 241 aa25.58■■□□□ 1.69
SIX3-201ENST00000260653 F5H6K3 240 aa25.58■■□□□ 1.69
SIX3-201ENST00000260653 ZNF202O95125 648 aa25.58■■□□□ 1.69
SIX3-201ENST00000260653 KLRC3Q07444 240 aa25.58■■□□□ 1.69
SIX3-201ENST00000260653 HPSEQ9Y251 543 aa25.58■■□□□ 1.69
SIX3-201ENST00000260653 SMCO2A6NFE2 343 aa25.58■■□□□ 1.68
SIX3-201ENST00000260653 TBC1D12O60347 775 aa25.58■■□□□ 1.68
SIX3-201ENST00000260653 COA7Q96BR5 231 aa25.58■■□□□ 1.68
SIX3-201ENST00000260653 USP17L10C9JJH3 530 aa25.57■■□□□ 1.68
SIX3-201ENST00000260653 CTAGE5O15320 804 aa25.57■■□□□ 1.68
SIX3-201ENST00000260653 TRAPPC10P48553 1259 aa25.57■■□□□ 1.68
SIX3-201ENST00000260653 TNNI2P48788 182 aa25.57■■□□□ 1.68
SIX3-201ENST00000260653 GMCL1P1Q8NEA9 526 aa25.57■■□□□ 1.68
SIX3-201ENST00000260653 ZBTB21Q9ULJ3 1066 aa25.57■■□□□ 1.68
SIX3-201ENST00000260653 SRPRBQ9Y5M8 271 aaKnown RBP25.57■■□□□ 1.68
SIX3-201ENST00000260653 CCDC194A0A1B0GVG4 234 aa25.57■■□□□ 1.68
SIX3-201ENST00000260653 NDUFB10O96000 172 aa25.57■■□□□ 1.68
SIX3-201ENST00000260653 NUP88Q99567 741 aaPredicted RBP25.57■■□□□ 1.68
SIX3-201ENST00000260653 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.57■■□□□ 1.68
SIX3-201ENST00000260653 PPP1R11O60927 126 aaPredicted RBP25.56■■□□□ 1.68
SIX3-201ENST00000260653 C6orf50Q9HD87 102 aa25.56■■□□□ 1.68
SIX3-201ENST00000260653 PNMA6FA0A0J9YX94 578 aa25.56■■□□□ 1.68
SIX3-201ENST00000260653 FAM237AA0A1B0GTK4 181 aa25.56■■□□□ 1.68
SIX3-201ENST00000260653 hCG_1984214I3L0E3 225 aa25.56■■□□□ 1.68
SIX3-201ENST00000260653 ECE1P42892 770 aa25.56■■□□□ 1.68
SIX3-201ENST00000260653 SYKP43405 635 aa25.56■■□□□ 1.68
SIX3-201ENST00000260653 ZNF713Q8N859 430 aaPredicted RBP25.56■■□□□ 1.68
SIX3-201ENST00000260653 ERCC4Q92889 916 aaPredicted RBP25.56■■□□□ 1.68
SIX3-201ENST00000260653 SDF4Q9BRK5 362 aa25.56■■□□□ 1.68
SIX3-201ENST00000260653 KIF4BQ2VIQ3 1234 aa25.55■■□□□ 1.68
SIX3-201ENST00000260653 MORC2Q9Y6X9 1032 aaPredicted RBP25.55■■□□□ 1.68
SIX3-201ENST00000260653 BMP15O95972 392 aa25.55■■□□□ 1.68
SIX3-201ENST00000260653 GNA11P29992 359 aa25.55■■□□□ 1.68
SIX3-201ENST00000260653 MCM7P33993 719 aa25.55■■□□□ 1.68
SIX3-201ENST00000260653 PTGDRQ13258 359 aa25.55■■□□□ 1.68
SIX3-201ENST00000260653 TNFAIP1Q13829 316 aa25.55■■□□□ 1.68
SIX3-201ENST00000260653 MTMR8Q96EF0 704 aa25.55■■□□□ 1.68
SIX3-201ENST00000260653 TEPSINQ96N21 525 aa25.55■■□□□ 1.68
SIX3-201ENST00000260653 HACL1Q9UJ83 578 aa25.55■■□□□ 1.68
SIX3-201ENST00000260653 DICER1Q9UPY3 1922 aaKnown RBP25.54■■□□□ 1.68
SIX3-201ENST00000260653 INF2Q27J81 1249 aa25.54■■□□□ 1.68
SIX3-201ENST00000260653 SASS6Q6UVJ0 657 aa25.54■■□□□ 1.68
SIX3-201ENST00000260653 ACER1Q8TDN7 264 aa25.54■■□□□ 1.68
SIX3-201ENST00000260653 CSRNP2Q9H175 543 aa25.54■■□□□ 1.68
SIX3-201ENST00000260653 ESYT2A0FGR8 921 aa25.54■■□□□ 1.68
SIX3-201ENST00000260653 ZBTB5O15062 677 aa25.54■■□□□ 1.68
SIX3-201ENST00000260653 LMNB1P20700 586 aa25.54■■□□□ 1.68
SIX3-201ENST00000260653 GMCL1Q96IK5 515 aa25.54■■□□□ 1.68
SIX3-201ENST00000260653 ATP2C1P98194 919 aaPredicted RBP25.53■■□□□ 1.68
SIX3-201ENST00000260653 MAP3K10Q02779 954 aa25.53■■□□□ 1.68
SIX3-201ENST00000260653 SPICE1Q8N0Z3 855 aa25.53■■□□□ 1.68
SIX3-201ENST00000260653 ZNF579Q8NAF0 562 aaKnown RBP25.53■■□□□ 1.68
SIX3-201ENST00000260653 KCNH3Q9ULD8 1083 aa25.53■■□□□ 1.68
SIX3-201ENST00000260653 SBF1O95248 1867 aa25.53■■□□□ 1.68
SIX3-201ENST00000260653 CAP2P40123 477 aa25.53■■□□□ 1.68
SIX3-201ENST00000260653 ARHGEF10LQ9HCE6 1279 aa25.53■■□□□ 1.68
SIX3-201ENST00000260653 ANO6Q4KMQ2 910 aa25.52■■□□□ 1.68
SIX3-201ENST00000260653 USP49Q70CQ1 688 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms