RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 LDHBP07195 334 aaKnown RBP10.75□□□□□ -0.69
CTDSPL2-201ENST00000260327 MRPS25P82663 173 aaKnown RBP10.75□□□□□ -0.69
CTDSPL2-201ENST00000260327 RBL2Q08999 1139 aa10.75□□□□□ -0.69
CTDSPL2-201ENST00000260327 WDR78Q5VTH9 848 aa10.75□□□□□ -0.69
CTDSPL2-201ENST00000260327 ZNF354CQ86Y25 554 aa10.75□□□□□ -0.69
CTDSPL2-201ENST00000260327 DNAI2Q9GZS0 605 aa10.75□□□□□ -0.69
CTDSPL2-201ENST00000260327 HAUS4Q9H6D7 363 aa10.75□□□□□ -0.69
CTDSPL2-201ENST00000260327 HAUS7Q99871 368 aa10.75□□□□□ -0.69
CTDSPL2-201ENST00000260327 ABCB4P21439 1286 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 RPL13P26373 211 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 FAM47AQ5JRC9 791 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 MIER3Q7Z3K6 550 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 ARHGEF10O15013 1369 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 CXCR5P32302 372 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 RASA3Q14644 834 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 GEN1Q17RS7 908 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 MAK16Q9BXY0 300 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 FRMD4BQ9Y2L6 1034 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 LRRC24Q50LG9 513 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 SPATA5Q8NB90 893 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 EPB41L5Q9HCM4 733 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 INTS9Q9NV88 658 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 RTEL1Q9NZ71 1219 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 PROSER3Q2NL68 480 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 NSUN7Q8NE18 718 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 LSM14BQ9BX40 385 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 SLC7A5Q01650 507 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 SMYD4Q8IYR2 804 aaPredicted RBP10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 KLHL29Q96CT2 875 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 CSRNP2Q9H175 543 aa10.74□□□□□ -0.69
CTDSPL2-201ENST00000260327 CABP7Q86V35 215 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 ZNF654Q8IZM8 581 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 SYCE1Q8N0S2 351 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 U2AF1L4Q8WU68 220 aaKnown RBP10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 ATP7AQ04656 1500 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 TRIM66O15016 1216 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 PPP1R2P41236 205 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 GRAMD1CQ8IYS0 662 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 IMPG2Q9BZV3 1241 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 PKD2L1Q9P0L9 805 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 KDRP35968 1356 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 TBC1D1Q86TI0 1168 aaPredicted RBP10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 SNX29Q8TEQ0 813 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 TSC22D3Q99576 134 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 DBNLQ9UJU6 430 aaKnown RBP10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 CARMIL3Q8ND23 1372 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 USP27XA6NNY8 438 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 FLOT1O75955 427 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 TCP1P17987 556 aaKnown RBP10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 ITIH3Q06033 890 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 HERC4Q5GLZ8 1057 aaPredicted RBP10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 LRWD1Q9UFC0 647 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 AMFRQ9UKV5 643 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 ZMYM6O95789 1325 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 CHMP2AO43633 222 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 EHHADHQ08426 723 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 ZNF804AQ7Z570 1209 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 CADPS2Q86UW7 1296 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 FCHSD1Q86WN1 690 aa10.73□□□□□ -0.69
CTDSPL2-201ENST00000260327 SUN1O94901 812 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 SERPINB6P35237 376 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 PDCLQ13371 301 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 CXorf38Q8TB03 319 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 GMNNO75496 209 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 HEXIM1O94992 359 aaKnown RBP10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 EPHB4P54760 987 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 ARHGAP44Q17R89 818 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 DENND2AQ9ULE3 1009 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 ZDHHC9Q9Y397 364 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 CTNND1O60716 968 aaKnown RBP10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 RASSF7Q02833 373 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 PPP2R5DQ14738 602 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 CC2D1AQ6P1N0 951 aaPredicted RBP10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 WHAMMQ8TF30 809 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 XAB2Q9HCS7 855 aaKnown RBP10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 MORC2Q9Y6X9 1032 aaPredicted RBP10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 MYOM2P54296 1465 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 SPECC1L-ADORA2AF8WAN1 911 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 PDE8AO60658 829 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 MX2P20592 715 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 SPATA1Q5VX52 437 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 LPIN2Q92539 896 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 TRIM6Q9C030 488 aaPredicted RBP10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 HDAC9Q9UKV0 1011 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 A0A1W2PQ27 194 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 A0A1W2PQ64 194 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 A0A1W2PQD8 194 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 SCYL3Q8IZE3 742 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 SYMPKQ92797 1274 aaKnown RBP10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 TFCP2L1Q9NZI6 479 aa10.72□□□□□ -0.69
CTDSPL2-201ENST00000260327 RIMBP2O15034 1052 aa10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 MAEAQ7L5Y9 396 aa10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 ORAI2Q96SN7 254 aa10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 SCOCQ9UIL1 159 aa10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 ECM2O94769 699 aaPredicted RBP10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 ATP1A3P13637 1013 aa10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 SDR42E1Q8WUS8 393 aa10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 SAAL1Q96ER3 474 aa10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 INTUQ9ULD6 942 aa10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 APBA1Q02410 837 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms