RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 SYNRGQ9UMZ2 1314 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 CHD7Q9P2D1 2997 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 FOSL2P15408 326 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 RAG1P15918 1043 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 RASA1P20936 1047 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 KCTD2Q14681 263 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 KCNA10Q16322 511 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 TSHZ3Q63HK5 1081 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 CCSAPQ6IQ19 270 aaPredicted RBP15.22■□□□□ 0.03
CSHL1-201ENST00000259003 KLHDC9Q8NEP7 349 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 CHMP4CQ96CF2 233 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 SH2D4AQ9H788 454 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 KANSL2Q9H9L4 492 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 TMEM39AQ9NV64 488 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 TACC3Q9Y6A5 838 aa15.22■□□□□ 0.03
CSHL1-201ENST00000259003 LRRC37A2A6NM11 1700 aa15.21■□□□□ 0.03
CSHL1-201ENST00000259003 GRXCR1A8MXD5 290 aa15.21■□□□□ 0.03
CSHL1-201ENST00000259003 NDUFB10O96000 172 aa15.21■□□□□ 0.03
CSHL1-201ENST00000259003 ACLYP53396 1101 aa15.21■□□□□ 0.03
CSHL1-201ENST00000259003 C16orf59Q7L2K0 433 aa15.21■□□□□ 0.03
CSHL1-201ENST00000259003 RNF180Q86T96 592 aa15.21■□□□□ 0.03
CSHL1-201ENST00000259003 RPAP2Q8IXW5 612 aaPredicted RBP15.21■□□□□ 0.03
CSHL1-201ENST00000259003 CPXCR1Q8N123 301 aa15.21■□□□□ 0.03
CSHL1-201ENST00000259003 DIS3Q9Y2L1 958 aaKnown RBP15.21■□□□□ 0.03
CSHL1-201ENST00000259003 DDX49Q9Y6V7 483 aaKnown RBP15.21■□□□□ 0.03
CSHL1-201ENST00000259003 ROBO3Q96MS0 1386 aa15.21■□□□□ 0.02
CSHL1-201ENST00000259003 DNAJC25-GNG10A0A024R161 153 aa15.2■□□□□ 0.02
CSHL1-201ENST00000259003 GSG1L2A8MUP6 293 aa15.2■□□□□ 0.02
CSHL1-201ENST00000259003 AKR1A1P14550 325 aa15.2■□□□□ 0.02
CSHL1-201ENST00000259003 PBX2P40425 430 aa15.2■□□□□ 0.02
CSHL1-201ENST00000259003 UBE3CQ15386 1083 aa15.2■□□□□ 0.02
CSHL1-201ENST00000259003 C20orf194Q5TEA3 1177 aa15.2■□□□□ 0.02
CSHL1-201ENST00000259003 SNRNP48Q6IEG0 339 aaKnown RBP15.2■□□□□ 0.02
CSHL1-201ENST00000259003 STRBPQ96SI9 672 aaKnown RBP15.2■□□□□ 0.02
CSHL1-201ENST00000259003 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.2■□□□□ 0.02
CSHL1-201ENST00000259003 RAVER2Q9HCJ3 691 aaKnown RBP15.2■□□□□ 0.02
CSHL1-201ENST00000259003 EPB41L4AQ9HCS5 686 aaPredicted RBP15.2■□□□□ 0.02
CSHL1-201ENST00000259003 GOPCQ9HD26 462 aa15.2■□□□□ 0.02
CSHL1-201ENST00000259003 NRBP1Q9UHY1 535 aa15.2■□□□□ 0.02
CSHL1-201ENST00000259003 ZHX1Q9UKY1 873 aaPredicted RBP15.2■□□□□ 0.02
CSHL1-201ENST00000259003 TRIP12Q14669 1992 aaPredicted RBP15.2■□□□□ 0.02
CSHL1-201ENST00000259003 MINDY4BA8MYZ0 360 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 F5H6K3 240 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 RAB11FIP3O75154 756 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 PRDM1O75626 825 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 FPGSQ05932 587 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 KLRC3Q07444 240 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 OSBP2Q969R2 916 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 SLF1Q9BQI6 1058 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 STARD7Q9NQZ5 370 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 TBX21Q9UL17 535 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 TET1Q8NFU7 2136 aa15.19■□□□□ 0.02
CSHL1-201ENST00000259003 IGKV6D-41A0A0C4DH26 115 aa15.18■□□□□ 0.02
CSHL1-201ENST00000259003 ACRP10323 421 aa15.18■□□□□ 0.02
CSHL1-201ENST00000259003 DNAJB2P25686 324 aa15.18■□□□□ 0.02
CSHL1-201ENST00000259003 ANKRD33Q7Z3H0 272 aa15.18■□□□□ 0.02
CSHL1-201ENST00000259003 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.18■□□□□ 0.02
CSHL1-201ENST00000259003 CLIP2Q9UDT6 1046 aa15.18■□□□□ 0.02
CSHL1-201ENST00000259003 PRRC2BQ5JSZ5 2229 aaKnown RBP15.18■□□□□ 0.02
CSHL1-201ENST00000259003 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.17■□□□□ 0.02
CSHL1-201ENST00000259003 RBAK-RBAKDNI3L0D1 243 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 M0R2C6 588 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 CTAGE5O15320 804 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 HMMRO75330 724 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 TIMP1P01033 207 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 CDK7P50613 346 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 BEX3Q00994 111 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 CNTN2Q02246 1040 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 ACVR2BQ13705 512 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 TMEM240Q5SV17 173 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 TMEM63BQ5T3F8 832 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 MAMDC4Q6UXC1 1216 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 LRRC47Q8N1G4 583 aaKnown RBP15.17■□□□□ 0.02
CSHL1-201ENST00000259003 KIFC2Q96AC6 838 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 DDX11Q96FC9 970 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 TSEN34Q9BSV6 310 aaKnown RBP15.17■□□□□ 0.02
CSHL1-201ENST00000259003 TEX13BQ9BXU2 312 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 KATNBL1Q9H079 304 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.17■□□□□ 0.02
CSHL1-201ENST00000259003 NYAP2Q9P242 653 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 FAM184BQ9ULE4 1060 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 CNPY2Q9Y2B0 182 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 ASTN1O14525 1302 aa15.17■□□□□ 0.02
CSHL1-201ENST00000259003 ASGR1P07306 291 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 C6orf222P0C671 652 aaPredicted RBP15.16■□□□□ 0.02
CSHL1-201ENST00000259003 CSF2RAP15509 400 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 CCDC144BQ3MJ40 725 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 SBK1Q52WX2 424 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 RASGRP2Q7LDG7 609 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 AMOTL1Q8IY63 956 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 PPM1EQ8WY54 764 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 CEP95Q96GE4 821 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 TOX2Q96NM4 488 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 PPP1R12CQ9BZL4 782 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 ZNF576Q9H609 170 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 HOMER2Q9NSB8 354 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 ARPP21Q9UBL0 812 aaPredicted RBP15.16■□□□□ 0.02
CSHL1-201ENST00000259003 DDX19BQ9UMR2 479 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 UMODL1Q5DID0 1318 aa15.16■□□□□ 0.02
CSHL1-201ENST00000259003 SYNGAP1Q96PV0 1343 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms