RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 RASSF10A6NK89 507 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 PRSS47A8MTI9 375 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 HNRNPCP07910 306 aaKnown RBP eCLIP8.59□□□□□ -1.04
GPNMB-201ENST00000258733 CCT6AP40227 531 aaKnown RBP8.59□□□□□ -1.04
GPNMB-201ENST00000258733 UBASH3AP57075 661 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 LONRF2Q1L5Z9 754 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 PRPF40BQ6NWY9 871 aaKnown RBP8.59□□□□□ -1.04
GPNMB-201ENST00000258733 FAM173BQ6P4H8 233 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 BRSK2Q8IWQ3 736 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 FAM20CQ8IXL6 584 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 CCDC144CPQ8IYA2 1237 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 VPS50Q96JG6 964 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 SPACA7Q96KW9 195 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 NDNQ99608 321 aa8.59□□□□□ -1.04
GPNMB-201ENST00000258733 CLK4Q9HAZ1 481 aaKnown RBP8.59□□□□□ -1.04
GPNMB-201ENST00000258733 ZNF644Q9H582 1327 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-201ENST00000258733 USP27XA6NNY8 438 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 EFCAB8A8MWE9 144 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
GPNMB-201ENST00000258733 MYO1EQ12965 1108 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 SLC44A4Q53GD3 710 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 FAM209AQ5JX71 171 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 TCERG1LQ5VWI1 586 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 CEP128Q6ZU80 1094 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 MAATS1Q7Z4T9 603 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 GOLM1Q8NBJ4 401 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 SLAIN1Q8ND83 568 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 CGREF1Q99674 301 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 FAM204AQ9H8W3 233 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 LNPEPQ9UIQ6 1025 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 MBD5Q9P267 1494 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 COL17A1Q9UMD9 1497 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-201ENST00000258733 MEFVO15553 781 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-201ENST00000258733 RNASEH2AO75792 299 aaKnown RBP8.58□□□□□ -1.04
GPNMB-201ENST00000258733 GLULP15104 373 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 CCDC153Q494R4 210 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 ZNF746Q6NUN9 644 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-201ENST00000258733 CYB5D1Q6P9G0 228 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 DGLUCYQ7Z3D6 616 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 SPERTQ8NA61 448 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 SH3KBP1Q96B97 665 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 NSRP1Q9H0G5 558 aaKnown RBP8.58□□□□□ -1.04
GPNMB-201ENST00000258733 ZNF148Q9UQR1 794 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 C15orf41Q9Y2V0 281 aa8.58□□□□□ -1.04
GPNMB-201ENST00000258733 GPR75-ASB3A0A0A6YYF3 556 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 LRRD1A4D1F6 860 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 TADA3O75528 432 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 ATP5JP18859 108 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 ETV3P41162 512 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 NLRP12P59046 1061 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 BCL2A1Q16548 175 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 PROSER3Q2NL68 480 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 ERICH1Q86X53 443 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 GPR161Q8N6U8 529 aaKnown RBP8.57□□□□□ -1.04
GPNMB-201ENST00000258733 LPIN2Q92539 896 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 C8orf76Q96K31 380 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 PSKH2Q96QS6 385 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 SPC25Q9HBM1 224 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 RIMKLBQ9ULI2 386 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 ASB3Q9Y575 518 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 PRG4Q92954 1404 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-201ENST00000258733 BUB1BO60566 1050 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-201ENST00000258733 N4BP1O75113 896 aaKnown RBP8.57□□□□□ -1.04
GPNMB-201ENST00000258733 CES1P23141 567 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 HSD17B7P56937 341 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 MXRA7P84157 204 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 LAPTM5Q13571 262 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 PRKG1Q13976 671 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 PCNX4Q63HM2 1172 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 B4GALNT4Q76KP1 1039 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 SRGAP1Q7Z6B7 1085 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 GALNT6Q8NCL4 622 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 RASSF8Q8NHQ8 419 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 NPLOC4Q8TAT6 608 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 GLMNQ92990 594 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 CFDP1Q9UEE9 299 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-201ENST00000258733 ADGRL2O95490 1459 aa8.57□□□□□ -1.04
GPNMB-201ENST00000258733 A0A1W2PQ67 120 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 LUC7L3O95232 432 aaKnown RBP8.56□□□□□ -1.04
GPNMB-201ENST00000258733 NPTXRO95502 500 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 ADRA2BP18089 450 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 CD97P48960 835 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 MTTPP55157 894 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 GEMIN4P57678 1058 aaKnown RBP8.56□□□□□ -1.04
GPNMB-201ENST00000258733 IFFO1Q0D2I5 559 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 TMTC4Q5T4D3 741 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 ZNF554Q86TJ5 538 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 AFAP1L1Q8TED9 768 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 TRPC4APQ8TEL6 797 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 HNRNPABQ99729 332 aaKnown RBP8.56□□□□□ -1.04
GPNMB-201ENST00000258733 BEGAINQ9BUH8 593 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 NUP58Q9BVL2 599 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 L3MBTL1Q9Y468 752 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 RAPGEF6Q8TEU7 1601 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 M0QX08 132 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 MUSKO15146 869 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 B4GALT4O60513 344 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 LGR5O75473 907 aa8.56□□□□□ -1.04
GPNMB-201ENST00000258733 S100A1P23297 94 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms