RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 THRAP3Q9Y2W1 955 aaKnown RBP16.56■□□□□ 0.24
MSI1-201ENST00000257552 DUSP10Q9Y6W6 482 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 DOT1LQ8TEK3 1739 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 ITIH6Q6UXX5 1313 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 MACROD2A1Z1Q3 448 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
MSI1-201ENST00000257552 EZH2Q15910 746 aaKnown RBP16.55■□□□□ 0.24
MSI1-201ENST00000257552 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 TACC3Q9Y6A5 838 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 NWD2Q9ULI1 1742 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 LRP6O75581 1613 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 PSMD14O00487 310 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 HERVK_113P62684 666 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 CCDC91Q7Z6B0 441 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 MAGEB6Q8N7X4 407 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 ANKRD20A12PQ8NF67 263 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 HDAC7Q8WUI4 952 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 GSDMAQ96QA5 445 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 FAM107BQ9H098 131 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 HAUS4Q9H6D7 363 aa16.55■□□□□ 0.24
MSI1-201ENST00000257552 SHTN1A0MZ66 631 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 PRDM1O75626 825 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 INPP5BP32019 993 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 PPARAQ07869 468 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 ERFEQ4G0M1 354 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 TCP11X2Q5H9J9 407 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 LPIN2Q92539 896 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 LACRTQ9GZZ8 138 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 NAPBQ9H115 298 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 LIMA1Q9UHB6 759 aaKnown RBP16.54■□□□□ 0.24
MSI1-201ENST00000257552 PDE6AP16499 860 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 KCNV1Q6PIU1 500 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 MIGA1Q8NAN2 632 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 OR8K1Q8NGG5 319 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 NELFBQ8WX92 580 aa16.54■□□□□ 0.24
MSI1-201ENST00000257552 SRP68Q9UHB9 627 aaKnown RBP16.54■□□□□ 0.24
MSI1-201ENST00000257552 SEMA3EO15041 775 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 SHOX2O60902 331 aaPredicted RBP16.53■□□□□ 0.24
MSI1-201ENST00000257552 TSR1Q2NL82 804 aaKnown RBP16.53■□□□□ 0.24
MSI1-201ENST00000257552 SH3RF1Q7Z6J0 888 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
MSI1-201ENST00000257552 SPATA5Q8NB90 893 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 AATFQ9NY61 560 aaKnown RBP eCLIP16.53■□□□□ 0.24
MSI1-201ENST00000257552 LUC7L2Q9Y383 392 aaKnown RBP16.53■□□□□ 0.24
MSI1-201ENST00000257552 RCCD1A6NED2 376 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 DEXIO95424 95 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 NTSR2O95665 410 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 IGHMBP2P38935 993 aaKnown RBP16.53■□□□□ 0.24
MSI1-201ENST00000257552 SLC7A5Q01650 507 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 CYP27A1Q02318 531 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 PPFIA1Q13136 1202 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 CCDC152Q4G0S7 254 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 PSMB7Q99436 277 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 ABCF2Q9UG63 623 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 GDAQ9Y2T3 454 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 STK36Q9NRP7 1315 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 TRIM49BA6NDI0 452 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 IDEP14735 1019 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 LIFRP42702 1097 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 PAK1Q13153 545 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 GPIHBP1Q8IV16 184 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 ARMT1Q9H993 441 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 CAPN7Q9Y6W3 813 aa16.53■□□□□ 0.24
MSI1-201ENST00000257552 SLC5A1P13866 664 aa16.52■□□□□ 0.24
MSI1-201ENST00000257552 PPARDQ03181 441 aa16.52■□□□□ 0.24
MSI1-201ENST00000257552 CHRNDQ07001 517 aa16.52■□□□□ 0.24
MSI1-201ENST00000257552 WTAPQ15007 396 aa16.52■□□□□ 0.24
MSI1-201ENST00000257552 PAPD7Q5XG87 772 aaKnown RBP16.52■□□□□ 0.24
MSI1-201ENST00000257552 NUP98P52948 1817 aa16.52■□□□□ 0.23
MSI1-201ENST00000257552 AHDC1Q5TGY3 1603 aaPredicted RBP16.52■□□□□ 0.23
MSI1-201ENST00000257552 TARSL2A2RTX5 802 aaKnown RBP16.52■□□□□ 0.23
MSI1-201ENST00000257552 H0YHG0 523 aa16.52■□□□□ 0.23
MSI1-201ENST00000257552 EIF3HO15372 352 aaKnown RBP eCLIP16.52■□□□□ 0.23
MSI1-201ENST00000257552 PRKAB2O43741 272 aa16.52■□□□□ 0.23
MSI1-201ENST00000257552 MAP2K2P36507 400 aa16.52■□□□□ 0.23
MSI1-201ENST00000257552 GYG1P46976 350 aa16.52■□□□□ 0.23
MSI1-201ENST00000257552 ATP1A2P50993 1020 aa16.52■□□□□ 0.23
MSI1-201ENST00000257552 CKAP4Q07065 602 aaKnown RBP16.52■□□□□ 0.23
MSI1-201ENST00000257552 PDCLQ13371 301 aa16.52■□□□□ 0.23
MSI1-201ENST00000257552 SWT1Q5T5J6 900 aaKnown RBP16.52■□□□□ 0.23
MSI1-201ENST00000257552 KCTD16Q68DU8 428 aa16.52■□□□□ 0.23
MSI1-201ENST00000257552 CEP89Q96ST8 783 aa16.52■□□□□ 0.23
MSI1-201ENST00000257552 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.23
MSI1-201ENST00000257552 DMGDHQ9UI17 866 aaKnown RBP16.52■□□□□ 0.23
MSI1-201ENST00000257552 LRRC10BA6NIK2 292 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 ZEB2O60315 1214 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 SMCR8Q8TEV9 937 aaPredicted RBP16.51■□□□□ 0.23
MSI1-201ENST00000257552 ARL8AQ96BM9 186 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 SHISA4Q96DD7 197 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 STRBPQ96SI9 672 aaKnown RBP16.51■□□□□ 0.23
MSI1-201ENST00000257552 SMARCAL1Q9NZC9 954 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 XDHP47989 1333 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 MYH14Q7Z406 1995 aaKnown RBP16.51■□□□□ 0.23
MSI1-201ENST00000257552 MYO1FO00160 1098 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 MFSD6Q6ZSS7 791 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 AMIGO3Q86WK7 504 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 IFNL3Q8IZI9 196 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 CXorf56Q9H5V9 222 aa16.51■□□□□ 0.23
MSI1-201ENST00000257552 JAG2Q9Y219 1238 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms