RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 DSCC1Q9BVC3 393 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 USP6P35125 1406 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 KLK7P49862 253 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 APTXQ7Z2E3 356 aaKnown RBP20.37■□□□□ 0.85
PTPN12-201ENST00000248594 OSBPL7Q9BZF2 842 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 NLRP2Q9NX02 1062 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 SMIM23A6NLE4 172 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 MDH1P40925 334 aaKnown RBP20.37■□□□□ 0.85
PTPN12-201ENST00000248594 ANTXR2P58335 489 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 CAPRIN2Q6IMN6 1127 aaKnown RBP20.37■□□□□ 0.85
PTPN12-201ENST00000248594 LMBR1LQ6UX01 489 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 KCNV2Q8TDN2 545 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 AGPAT5Q9NUQ2 364 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 EID1Q9Y6B2 187 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 ZBTB43O43298 467 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 SPA17Q15506 151 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 ZNF142P52746 1687 aaPredicted RBP20.36■□□□□ 0.85
PTPN12-201ENST00000248594 ZNF233A6NK53 670 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 PSMD14O00487 310 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 RNF113AO15541 343 aaKnown RBP20.36■□□□□ 0.85
PTPN12-201ENST00000248594 ERCC5P28715 1186 aaPredicted RBP20.36■□□□□ 0.85
PTPN12-201ENST00000248594 PI16Q6UXB8 463 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 CCDC51Q96ER9 411 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 XAGE2Q96GT9 111 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 NOD2Q9HC29 1040 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 STIM2Q9P246 746 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 IGKV5-2P06315 115 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 NOSTRINQ8IVI9 506 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 CACNA2D3Q8IZS8 1091 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 THEMISQ8N1K5 641 aaPredicted RBP20.36■□□□□ 0.85
PTPN12-201ENST00000248594 NKX2-3Q8TAU0 364 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 HVCN1Q96D96 273 aa20.36■□□□□ 0.85
PTPN12-201ENST00000248594 DLC1Q96QB1 1528 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 HEXIM1O94992 359 aaKnown RBP20.35■□□□□ 0.85
PTPN12-201ENST00000248594 NELFBQ8WX92 580 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 STK38LQ9Y2H1 464 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 NRXN3Q9Y4C0 1643 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 SLIT1O75093 1534 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 DIAPH2O60879 1101 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 SCTRP47872 440 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 KRT83P78385 493 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 SSRP1Q08945 709 aaKnown RBP20.35■□□□□ 0.85
PTPN12-201ENST00000248594 TYW1BQ6NUM6 668 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 OXER1Q8TDS5 423 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 RBM12Q9NTZ6 932 aaKnown RBP20.35■□□□□ 0.85
PTPN12-201ENST00000248594 GDAQ9Y2T3 454 aa20.35■□□□□ 0.85
PTPN12-201ENST00000248594 A0A087WZG4 1122 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 CYLC1P35663 651 aaPredicted RBP20.34■□□□□ 0.85
PTPN12-201ENST00000248594 WLSQ5T9L3 541 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 CAPN6Q9Y6Q1 641 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 ANKRD26Q9UPS8 1709 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 A0A087X0B3 334 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 CDKL5O76039 1030 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 PLEKP08567 350 aaPredicted RBP20.34■□□□□ 0.85
PTPN12-201ENST00000248594 SLC8A1P32418 973 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 PTPN12Q05209 780 aaKnown RBP20.34■□□□□ 0.85
PTPN12-201ENST00000248594 ZNF174Q15697 407 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 SPATS2Q86XZ4 545 aaKnown RBP20.34■□□□□ 0.85
PTPN12-201ENST00000248594 PLAAQ9Y263 795 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 SETD1AO15047 1707 aaKnown RBP20.34■□□□□ 0.85
PTPN12-201ENST00000248594 ARHGAP23Q9P227 1491 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 INHBEP58166 350 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 RBBP5Q15291 538 aaKnown RBP20.34■□□□□ 0.85
PTPN12-201ENST00000248594 TMEM67Q5HYA8 995 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 CCDC42Q96M95 316 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 SH3GL3Q99963 347 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 KDRP35968 1356 aa20.34■□□□□ 0.85
PTPN12-201ENST00000248594 KIF3CO14782 793 aa20.33■□□□□ 0.85
PTPN12-201ENST00000248594 TACC1O75410 805 aa20.33■□□□□ 0.85
PTPN12-201ENST00000248594 MRPL12P52815 198 aaKnown RBP20.33■□□□□ 0.85
PTPN12-201ENST00000248594 ZMYM1Q5SVZ6 1142 aa20.33■□□□□ 0.85
PTPN12-201ENST00000248594 CABLES1Q8TDN4 633 aa20.33■□□□□ 0.85
PTPN12-201ENST00000248594 RPGRIP1Q96KN7 1286 aa20.33■□□□□ 0.85
PTPN12-201ENST00000248594 AGXT2Q9BYV1 514 aa20.33■□□□□ 0.85
PTPN12-201ENST00000248594 HELLSQ9NRZ9 838 aa20.33■□□□□ 0.85
PTPN12-201ENST00000248594 FAM107AO95990 144 aa20.33■□□□□ 0.84
PTPN12-201ENST00000248594 SSR1P43307 286 aaKnown RBP20.33■□□□□ 0.84
PTPN12-201ENST00000248594 KRT12Q99456 494 aa20.33■□□□□ 0.84
PTPN12-201ENST00000248594 PLEKHG3A1L390 1219 aa20.33■□□□□ 0.84
PTPN12-201ENST00000248594 B4DLN1 442 aa20.33■□□□□ 0.84
PTPN12-201ENST00000248594 GLI1P08151 1106 aa20.33■□□□□ 0.84
PTPN12-201ENST00000248594 SKOR1P84550 965 aa20.33■□□□□ 0.84
PTPN12-201ENST00000248594 UBLCP1Q8WVY7 318 aaPredicted RBP20.33■□□□□ 0.84
PTPN12-201ENST00000248594 SYMPKQ92797 1274 aaKnown RBP20.33■□□□□ 0.84
PTPN12-201ENST00000248594 PAGE5Q96GU1 130 aa20.33■□□□□ 0.84
PTPN12-201ENST00000248594 FBXO2Q9UK22 296 aaPredicted RBP20.33■□□□□ 0.84
PTPN12-201ENST00000248594 SH3BP1Q9Y3L3 701 aa20.33■□□□□ 0.84
PTPN12-201ENST00000248594 MYH8P13535 1937 aa20.32■□□□□ 0.84
PTPN12-201ENST00000248594 ACTN4O43707 911 aaKnown RBP20.32■□□□□ 0.84
PTPN12-201ENST00000248594 AKR1B10O60218 316 aa20.32■□□□□ 0.84
PTPN12-201ENST00000248594 ANP32DO95626 131 aa20.32■□□□□ 0.84
PTPN12-201ENST00000248594 TOB1P50616 345 aaPredicted RBP20.32■□□□□ 0.84
PTPN12-201ENST00000248594 PAPD7Q5XG87 772 aaKnown RBP20.32■□□□□ 0.84
PTPN12-201ENST00000248594 ALS2CLQ60I27 953 aa20.32■□□□□ 0.84
PTPN12-201ENST00000248594 NHEJ1Q9H9Q4 299 aaPredicted RBP20.32■□□□□ 0.84
PTPN12-201ENST00000248594 ANKRD20A8PQ5CZ79 823 aa20.32■□□□□ 0.84
PTPN12-201ENST00000248594 TMC4Q7Z404 712 aa20.32■□□□□ 0.84
PTPN12-201ENST00000248594 SEC16BQ96JE7 1060 aa20.32■□□□□ 0.84
PTPN12-201ENST00000248594 ANGEL1Q9UNK9 670 aaKnown RBP20.32■□□□□ 0.84
PTPN12-201ENST00000248594 GMNCA6NCL1 334 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms