RNA–Protein interactions for RNA: ENST00000248151.4

TUBBP1-201, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,335 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-201ENST00000248151 VAT1LQ9HCJ6 419 aa13.01□□□□□ -0.33
TUBBP1-201ENST00000248151 PRR12Q9ULL5 1215 aa13.01□□□□□ -0.33
TUBBP1-201ENST00000248151 SH2B2O14492 632 aaPredicted RBP13□□□□□ -0.33
TUBBP1-201ENST00000248151 TNPO2O14787 897 aaKnown RBP13□□□□□ -0.33
TUBBP1-201ENST00000248151 RXRAP19793 462 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 CASTP20810 708 aaKnown RBP13□□□□□ -0.33
TUBBP1-201ENST00000248151 STAT2P52630 851 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 FCGRTP55899 365 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 ZNF543Q08ER8 600 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 KRT32Q14532 448 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 SART3Q15020 963 aaKnown RBP13□□□□□ -0.33
TUBBP1-201ENST00000248151 CCDC174Q6PII3 467 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 CCAR1Q8IX12 1150 aaKnown RBP13□□□□□ -0.33
TUBBP1-201ENST00000248151 CCDC144CPQ8IYA2 1237 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 REPS2Q8NFH8 660 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 NUP133Q8WUM0 1156 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 LARP6Q9BRS8 491 aaKnown RBP13□□□□□ -0.33
TUBBP1-201ENST00000248151 MOV10L1Q9BXT6 1211 aaKnown RBP13□□□□□ -0.33
TUBBP1-201ENST00000248151 SPATC1LQ9H0A9 340 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 RIPK3Q9Y572 518 aa13□□□□□ -0.33
TUBBP1-201ENST00000248151 CTDP1Q9Y5B0 961 aaPredicted RBP13□□□□□ -0.33
TUBBP1-201ENST00000248151 ZBED4O75132 1171 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 SNHG28P0DPA3 235 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 ERCC3P19447 782 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 STAT3P40763 770 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 NT5C2P49902 561 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 BLOC1S2Q6QNY1 142 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 Q6ZUG5 572 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 FAM160B2Q86V87 743 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 NCAPG2Q86XI2 1143 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 GTF3C2Q8WUA4 911 aaPredicted RBP12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 AGBL1Q96MI9 1066 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 BRPF3Q9ULD4 1205 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 A0A0G2JMZ2 1700 aa12.99□□□□□ -0.33
TUBBP1-201ENST00000248151 MYPNQ86TC9 1320 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 CCDC69A6NI79 296 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 PARP1P09874 1014 aaKnown RBP12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 RPS6KB1P23443 525 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 PRKCZQ05513 592 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 SYDE2Q5VT97 1194 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 GPR142Q7Z601 462 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 ZNF654Q8IZM8 581 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 MB21D1Q8N884 522 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 UPF3BQ9BZI7 483 aaKnown RBP12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 CWC22Q9HCG8 908 aaKnown RBP12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 SRRDQ9UH36 339 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 MAD2L2Q9UI95 211 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 GJD2Q9UKL4 321 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 ZNF214Q9UL59 606 aaPredicted RBP12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 NAP1L2Q9ULW6 460 aaPredicted RBP12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 PTCH2Q9Y6C5 1203 aa12.98□□□□□ -0.33
TUBBP1-201ENST00000248151 KLRF2D3W0D1 207 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 PLA2G6O60733 806 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 CYP2B6P20813 491 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 HOXD10P28358 340 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 FLT3LGP49771 235 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 FGD1P98174 961 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 APOBRQ0VD83 1088 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 TROAPQ12815 778 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 ARHGEF6Q15052 776 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 SLC35G1Q2M3R5 365 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 SNRNP48Q6IEG0 339 aaKnown RBP12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 BTNL9Q6UXG8 535 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 PLEKHH3Q7Z736 793 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 NBPF11Q86T75 865 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 ADGRF4Q8IZF3 695 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 TNS4Q8IZW8 715 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 CMTR1Q8N1G2 835 aaKnown RBP12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 COA7Q96BR5 231 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 HOMER2Q9NSB8 354 aa12.97□□□□□ -0.33
TUBBP1-201ENST00000248151 ZNF536O15090 1300 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 PLXNA1Q9UIW2 1896 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 PALM3A6NDB9 673 aaPredicted RBP12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 MYCP01106 439 aaPredicted RBP12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 PSMA5P28066 241 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 MAPK4P31152 587 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 LIFRP42702 1097 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 CCNA1P78396 465 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 GRM4Q14833 912 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 ASPRV1Q53RT3 343 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 GPATCH4Q5T3I0 446 aaKnown RBP12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 RUFY3Q7L099 469 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 RIOX2Q8IUF8 465 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 TMTC2Q8N394 836 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 CCDC82Q8N4S0 544 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 RAET1EQ8TD07 263 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
TUBBP1-201ENST00000248151 KLF18A0A0U1RQI7 1052 aa12.95□□□□□ -0.34
TUBBP1-201ENST00000248151 ALAS1P13196 640 aa12.95□□□□□ -0.34
TUBBP1-201ENST00000248151 ELNP15502 786 aa12.95□□□□□ -0.34
TUBBP1-201ENST00000248151 PTPREP23469 700 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms