RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CCDC148Q8NFR7 591 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 GDAP1L1Q96MZ0 367 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 CDCA7Q9BWT1 371 aaPredicted RBP14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 NYXQ9GZU5 481 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 ANAPC4Q9UJX5 808 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 PARP1P09874 1014 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 RFC4P35249 363 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 ENOX2Q16206 610 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 CEP112Q8N8E3 955 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 CHP1Q99653 195 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 PYM1Q9BRP8 204 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 UBA5Q9GZZ9 404 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 DEF6Q9H4E7 631 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 ZHX3Q9H4I2 956 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 TTF2Q9UNY4 1162 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 AKAP11Q9UKA4 1901 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 NUP188Q5SRE5 1749 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 GLI3P10071 1580 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 TXKP42681 527 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 TBC1D8BQ0IIM8 1120 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 SLC51AQ86UW1 340 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 ZNF384Q8TF68 577 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 NAA15Q9BXJ9 866 aaKnown RBP14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 RTCBQ9Y3I0 505 aaKnown RBP14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 FAM205AQ6ZU69 1335 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 MACROD2A1Z1Q3 448 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 KLRF2D3W0D1 207 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 TECP42680 631 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 FUT2Q10981 343 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 TCP11X2Q5H9J9 407 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 CC2D1AQ6P1N0 951 aaPredicted RBP14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 TMEM60Q9H2L4 133 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 TRIM10Q9UDY6 481 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 CDC23Q9UJX2 597 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 B4DLN1 442 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 C6orf229H3BNL8 230 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 GNAQP50148 359 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 ZNF658Q5TYW1 1059 aaPredicted RBP14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 USP17L2Q6R6M4 530 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 DYMQ7RTS9 669 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 BIN2Q9UBW5 565 aaPredicted RBP14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 PCDHA4Q9UN74 947 aa14.17□□□□□ -0.14
RAB3IP-201ENST00000247833 PLA2G4AP47712 749 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 LONRF2Q1L5Z9 754 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 NCAPH2Q6IBW4 605 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 SRGAP1Q7Z6B7 1085 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 TEX11Q8IYF3 940 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 RABGGTAQ92696 567 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 JADE2Q9NQC1 790 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 ABHD10Q9NUJ1 306 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 ABL1P00519 1130 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 PTF1AQ7RTS3 328 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 CABP7Q86V35 215 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 TRIM34Q9BYJ4 488 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 DISC1Q9NRI5 854 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 VPS18Q9P253 973 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 RWDD2AQ9UIY3 292 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 CCNL1Q9UK58 526 aaPredicted RBP14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 EPN1Q9Y6I3 576 aaPredicted RBP14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 G3V3G9 751 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 LONP1P36776 959 aaKnown RBP14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 MATR3P43243 847 aaKnown RBP eCLIP14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 SF3B3Q15393 1217 aaKnown RBP14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 DCAF8Q5TAQ9 597 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 CLEC4GQ6UXB4 293 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 RGS22Q8NE09 1264 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 RPGRQ92834 1020 aaKnown RBP14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 HPS3Q969F9 1004 aa14.16□□□□□ -0.14
RAB3IP-201ENST00000247833 SMCO2A6NFE2 343 aa14.15□□□□□ -0.14
RAB3IP-201ENST00000247833 FRMPD2Q68DX3 1309 aaPredicted RBP14.15□□□□□ -0.14
RAB3IP-201ENST00000247833 TRAPPC10P48553 1259 aa14.15□□□□□ -0.14
RAB3IP-201ENST00000247833 FBXO33Q7Z6M2 555 aa14.15□□□□□ -0.14
RAB3IP-201ENST00000247833 GOLGA6L1Q8N7Z2 621 aa14.15□□□□□ -0.14
RAB3IP-201ENST00000247833 OR8K1Q8NGG5 319 aa14.15□□□□□ -0.14
RAB3IP-201ENST00000247833 PSMB7Q99436 277 aa14.15□□□□□ -0.14
RAB3IP-201ENST00000247833 MMRN2Q9H8L6 949 aa14.15□□□□□ -0.14
RAB3IP-201ENST00000247833 MYH7P12883 1935 aa14.15□□□□□ -0.14
RAB3IP-201ENST00000247833 STRCP1A6NGW2 1772 aa14.15□□□□□ -0.15
RAB3IP-201ENST00000247833 SPATA31A1Q5TZJ5 1347 aa14.15□□□□□ -0.15
RAB3IP-201ENST00000247833 TTC26A0AVF1 554 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 MPHOSPH10O00566 681 aaKnown RBP14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 UFL1O94874 794 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 PCP11498 1178 aaKnown RBP14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 FKBP15Q5T1M5 1219 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 ELOA2Q8IYF1 753 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 CALML4Q96GE6 196 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 EYA3Q99504 573 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 NOC4LQ9BVI4 516 aaKnown RBP14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 SUGCTQ9HAC7 445 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 MYH15Q9Y2K3 1946 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 MYH2Q9UKX2 1941 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 ORC4O43929 436 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 LDHCP07864 332 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 PLCG1P19174 1290 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 TNNI2P48788 182 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 IL17AQ16552 155 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 CDKAL1Q5VV42 579 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 SLC39A2Q9NP94 309 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 RNF225M0QZC1 329 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms